RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 TOX2Q96NM4 488 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 POLR3CQ9BUI4 534 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 AMNQ9BXJ7 453 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM129AQ9BZQ8 928 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TMBIM4Q9HC24 238 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 OLFML3Q9NRN5 406 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 GCNT4Q9P109 453 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 ADAMTS1Q9UHI8 967 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 RAPGEFL1Q9UHV5 662 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 NAGPAQ9UK23 515 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 AMFRQ9UKV5 643 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TBX21Q9UL17 535 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 TTC7AQ9ULT0 858 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 SYNPO2Q9UMS6 1093 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 PCDHA2Q9Y5H9 948 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MROH7Q68CQ1 1323 aa9.31□□□□□ -0.92
CTNNA1-223ENST00000520520 MUC3AQ02505 3323 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM265A0A087WTH1 108 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM187AA6NFU0 413 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 E9PMD0 336 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 ARVCFO00192 962 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SART1O43290 800 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 FAM13AO94988 1023 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 EYA4O95677 639 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 GGPS1O95749 300 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TMEM253P0C7T8 217 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CTNNA1P35221 906 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PSMC2P35998 433 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SREBF1P36956 1147 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 DNA2P51530 1060 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CCL23P55773 120 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 ARHGAP4P98171 946 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PTK2Q05397 1052 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 IFFO1Q0D2I5 559 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CETN1Q12798 172 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 ALCAMQ13740 583 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 DHX34Q14147 1143 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PPP2R5AQ15172 486 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TCERG1LQ5VWI1 586 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 NAA35Q5VZE5 725 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SLFN13Q68D06 897 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CCSAPQ6IQ19 270 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CXCL17Q6UXB2 119 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 C16orf59Q7L2K0 433 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 EPM2AIP1Q7L775 607 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 OTOP2Q7RTS6 562 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CCDC91Q7Z6B0 441 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PACS2Q86VP3 889 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 NLRP14Q86W24 1093 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TPCN2Q8NHX9 752 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 IPO4Q8TEX9 1081 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 ZNF473Q8WTR7 871 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SCFD2Q8WU76 684 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 RFFLQ8WZ73 363 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CABS1Q96KC9 395 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 CEP89Q96ST8 783 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 NKX2-4Q9H2Z4 354 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 ABHD16BQ9H3Z7 469 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PLEKHA4Q9H4M7 779 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TUFT1Q9NNX1 390 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SMARCAL1Q9NZC9 954 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 EHD2Q9NZN4 543 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 KCND2Q9NZV8 630 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 TBC1D7Q9P0N9 293 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 NYAP2Q9P242 653 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 MSRAQ9UJ68 235 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 SALL4Q9UJQ4 1053 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 FEM1BQ9UK73 627 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 PCDHA1Q9Y5I3 950 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 UMODL1Q5DID0 1318 aa9.3□□□□□ -0.92
CTNNA1-223ENST00000520520 DNAJC25-GNG10A0A024R161 153 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ZBBXA8MT70 800 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MIF4GDA9UHW6 222 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 TNFRSF10AO00220 468 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 SNPHO15079 494 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 GCNT3O95395 438 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 PAEPP09466 180 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ALAS1P13196 640 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 PON1P27169 355 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 RDXP35241 583 aaKnown RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ZNF76P36508 570 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 HSD17B3P37058 310 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MLLT3P42568 568 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 LIG3P49916 1009 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ATP1A2P50993 1020 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 RABGGTBP53611 331 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 JAM2P57087 298 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 PSMC6P62333 389 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 PPP2R2AP63151 447 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 TNFAIP2Q03169 654 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ITGB3BPQ13352 177 aaPredicted RBP9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MYBPC2Q14324 1141 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 EPHA7Q15375 998 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 QRICH1Q2TAL8 776 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 ODF2Q5BJF6 829 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 POTEGQ6S5H5 508 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 MAMDC4Q6UXC1 1216 aa9.29□□□□□ -0.92
CTNNA1-223ENST00000520520 CCDC121Q6ZUS5 278 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms