RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 ANO5Q75V66 913 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 RRM2BQ7LG56 351 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 KDM4CQ9H3R0 1056 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 GRID2IPA4D2P6 1211 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 MAPK6Q16659 721 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 FAM49AQ9H0Q0 323 aaPredicted RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ECT2Q9H8V3 914 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 RNF146Q9NTX7 359 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 MYO1DO94832 1006 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 CAPN1P07384 714 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ACADSP16219 412 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 TBXAS1P24557 533 aaPredicted RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 CIITAP33076 1130 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 AP2B1P63010 937 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 NAALADL2Q58DX5 795 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 THEM5Q8N1Q8 247 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 POLR3FQ9H1D9 316 aaPredicted RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 C2orf40Q9H1Z8 148 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF609O15014 1411 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 MYBL1P10243 752 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 SCARF1Q14162 830 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF568Q3ZCX4 644 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 TAF1BQ53T94 588 aaPredicted RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 HABP4Q5JVS0 413 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 DDHD1Q8NEL9 900 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 EXT2Q93063 718 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 EIF2AK1Q9BQI3 630 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 DNAJC17Q9NVM6 304 aaKnown RBP12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 GMEB1Q9Y692 573 aa12.79□□□□□ -0.36
ERGIC1-208ENST00000520399 DENND3A2RUS2 1198 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 SRGAP2O75044 1071 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 WDR47O94967 919 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 AARS2Q5JTZ9 985 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 LONP2Q86WA8 852 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 SIX5Q8N196 739 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 NEDD1Q8NHV4 660 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF229Q9UJW7 825 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 HSPA4LO95757 839 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 ELMOD1Q8N336 334 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 ELAC2Q9BQ52 826 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TRAF3IP3Q9Y228 551 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 PTPRUQ92729 1446 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TDP2O95551 362 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 SERPINB10P48595 397 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 PSMC5P62195 406 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TRIM28Q13263 835 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 RCN1Q15293 331 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 PREPLQ4J6C6 727 aaPredicted RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 STOX1Q6ZVD7 989 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 PDIK1LQ8N165 341 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TMEM35BQ8NCS4 154 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 LXNQ9BS40 222 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 CCDC90BQ9GZT6 254 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 SAYSD1Q9NPB0 183 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 NDE1Q9NXR1 346 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 SEPT3Q9UH03 358 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TMA7Q9Y2S6 64 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 F5H6K3 240 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 RECQLP46063 649 aaPredicted RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 AARSP49588 968 aaKnown RBP eCLIP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 KLRC3Q07444 240 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 LBRQ14739 615 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 KRT72Q14CN4 511 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 CEP78Q5JTW2 689 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 CLEC17AQ6ZS10 378 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 TTC13Q8NBP0 860 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 WDR48Q8TAF3 677 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 ZNF473Q8WTR7 871 aaKnown RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 VPS39Q96JC1 886 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 MMP19Q99542 508 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 GABBR1Q9UBS5 961 aa12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 PRG3Q9Y2Y8 225 aaPredicted RBP12.78□□□□□ -0.36
ERGIC1-208ENST00000520399 UBE4BO95155 1302 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 PP2D1A8MPX8 630 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 KRT14P02533 472 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 CAV1Q03135 178 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 FSCBQ5H9T9 825 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 C12orf60Q5U649 245 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 E4F1Q66K89 784 aaPredicted RBP12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 SWSAP1Q6NVH7 229 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 PASD1Q8IV76 773 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 STAG2Q8N3U4 1231 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 PRELID1Q9Y255 219 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 PTPRMP28827 1452 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 PPP1R37O75864 691 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 ARIH2O95376 493 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 KCNA2P16389 499 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 ARL4CP56559 192 aa12.77□□□□□ -0.36
ERGIC1-208ENST00000520399 TMEM270Q6UE05 265 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms