RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 ADCY6O43306 1168 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 TSPAN6O43657 245 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 GNAT2P19087 354 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 PDCP20941 246 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 GUCY1A2P33402 732 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 SLC6A9P48067 706 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 SELENOPP49908 381 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 CDC42EP1Q00587 391 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 ICAM4Q14773 271 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 ELAVL1Q15717 326 aaKnown RBP4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 CSRP2Q16527 193 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 FAM102BQ5T8I3 360 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 THEMIS2Q5TEJ8 643 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 MAMDC4Q6UXC1 1216 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 USP45Q70EL2 814 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 TTC7BQ86TV6 843 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 RHOT1Q8IXI2 618 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 RAVER1Q8IY67 606 aaKnown RBP4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 GSPT2Q8IYD1 628 aaKnown RBP4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 PRR18Q8N4B5 295 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 MDGA1Q8NFP4 955 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 MDM1Q8TC05 714 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 MIEF2Q96C03 454 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 DEF6Q9H4E7 631 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 CD248Q9HCU0 757 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 SERPINB13Q9UIV8 391 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 HDAC5Q9UQL6 1122 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 TCAF1Q9Y4C2 921 aa4.28□□□□□ -1.72
HMGB1P41-201ENST00000520234 ATRNL1Q5VV63 1379 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 KRTAP29-1A8MX34 341 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 SLC16A6O15403 523 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 GPR32O75388 356 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 OFD1O75665 1012 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 SCGB1D2O95969 90 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 ALOX15P16050 662 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 HSPA6P17066 643 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 ACO1P21399 889 aaKnown RBP4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 RAB39AQ14964 217 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATP2B3Q16720 1220 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 C3orf36Q3SXR2 165 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 Q6ZSN1 163 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 RSPH3Q86UC2 560 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 SGMS1Q86VZ5 419 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 DRC7Q8IY82 874 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 TCEAL8Q8IYN2 117 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 REPS2Q8NFH8 660 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 CCHCR1Q8TD31 782 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 ST8SIA2Q92186 375 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 MAP3K14Q99558 947 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 KLC2Q9H0B6 622 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 NMRK2Q9NPI5 230 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 MAN1C1Q9NR34 630 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 CALCOCO1Q9P1Z2 691 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 AJAP1Q9UKB5 411 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 PCDHA13Q9Y5I0 950 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZMYM3Q14202 1370 aa4.27□□□□□ -1.73
HMGB1P41-201ENST00000520234 MYBBP1AQ9BQG0 1328 aaKnown RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GOLGA6CA6NDK9 693 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GOLGA6BA6NDN3 693 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 TBKBP1A7MCY6 615 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 CAPN14A8MX76 684 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 PRR5-ARHGAP8B1AHC4 643 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 PPFIA2O75334 1257 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 STC2O76061 302 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 ARIH2O95376 493 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 SNRPA1P09661 255 aaKnown RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GOLGA6DP0CG33 693 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 DDCP20711 480 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 MTM1Q13496 603 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 IL10RAQ13651 578 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 BMT2Q1RMZ1 405 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 FAM214AQ32MH5 1076 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 MINDY4Q4G0A6 757 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 DCAF17Q5H9S7 520 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 ATAT1Q5SQI0 421 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 MFSD14BQ5SR56 506 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 IFIT1BQ5T764 474 aaKnown RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 OTUD7BQ6GQQ9 843 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 DRICH1Q6PGQ1 229 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GPRIN1Q7Z2K8 1008 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 ZFP28Q8NHY6 868 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 NSUN6Q8TEA1 469 aaKnown RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 HPS3Q969F9 1004 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 VOPP1Q96AW1 172 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 C1GALT1C1Q96EU7 318 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 MVB12AQ96EY5 273 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 CEP95Q96GE4 821 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 WWC2-AS2Q96NR7 200 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 CPPED1Q9BRF8 314 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GTPBP4Q9BZE4 634 aaKnown RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 SLC12A5Q9H2X9 1139 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 AURKAIP1Q9NWT8 199 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GOLGA6AQ9NYA3 693 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 FAM30AQ9NZY2 134 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 POLHQ9Y253 713 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 PCDHB1Q9Y5F3 818 aa4.26□□□□□ -1.73
HMGB1P41-201ENST00000520234 GOLGA6L6A8MZA4 724 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 AMY1AP04745 511 aa4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 LPOP22079 712 aaPredicted RBP4.25□□□□□ -1.73
HMGB1P41-201ENST00000520234 MGAT1P26572 445 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms