RNA–Protein interactions for RNA: ENST00000520199.5

CLK4-205, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 857 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-205ENST00000520199 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 HACE1Q8IYU2 909 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 KREMEN2Q8NCW0 462 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 CMASQ8NFW8 434 aaPredicted RBP17.13■□□□□ 0.33
CLK4-205ENST00000520199 RIN2Q8WYP3 895 aaPredicted RBP17.13■□□□□ 0.33
CLK4-205ENST00000520199 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 SFXN1Q9H9B4 322 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 FNIP2Q9P278 1114 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 STK39Q9UEW8 545 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 LIMD1Q9UGP4 676 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 PHLPP2Q6ZVD8 1323 aa17.13■□□□□ 0.33
CLK4-205ENST00000520199 SMIM28A0A1B0GU29 152 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 H3BQV1 296 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 PLA2G4BP0C869 781 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 GRM5P41594 1212 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 VCPP55072 806 aaKnown RBP17.12■□□□□ 0.33
CLK4-205ENST00000520199 SIGLEC14Q08ET2 396 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 PTPAQ15257 358 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 ZRSR1Q15695 479 aaKnown RBP17.12■□□□□ 0.33
CLK4-205ENST00000520199 USP41Q3LFD5 358 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 DCAF4L1Q3SXM0 396 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 SEZ6Q53EL9 994 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 FAM173BQ6P4H8 233 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 ZDHHC14Q8IZN3 488 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 FIZ1Q96SL8 496 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 RAB34Q9BZG1 259 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 HCN4Q9Y3Q4 1203 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 STK24Q9Y6E0 443 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 SCN1AP35498 2009 aa17.12■□□□□ 0.33
CLK4-205ENST00000520199 CCDC195A0A1B0GUA6 201 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 TADA2AO75478 443 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 ADH1AP07327 375 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 MAPTP10636 758 aaKnown RBP17.11■□□□□ 0.33
CLK4-205ENST00000520199 CLCNKBP51801 687 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 OSTNP61366 133 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 UPP1Q16831 310 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 FAM171A1Q5VUB5 890 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 C15orf39Q6ZRI6 1047 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 ZBTB33Q86T24 672 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 SPIRE2Q8WWL2 714 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 KMT5AQ9NQR1 393 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 USTQ9Y2C2 406 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 CLIC4Q9Y696 253 aa17.11■□□□□ 0.33
CLK4-205ENST00000520199 TMEM189-UBE2V1I3L0A0 370 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 I3L4J1 428 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 FAM189A1O60320 539 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 GLUD1P00367 558 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 PLS3P13797 630 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 FGFR3P22607 806 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 HOXD11P31277 338 aaPredicted RBP17.1■□□□□ 0.33
CLK4-205ENST00000520199 RESTQ13127 1097 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 DMP1Q13316 513 aaPredicted RBP17.1■□□□□ 0.33
CLK4-205ENST00000520199 SF3A1Q15459 793 aaKnown RBP17.1■□□□□ 0.33
CLK4-205ENST00000520199 SLC10A6Q3KNW5 377 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 POTEHQ6S545 545 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 PRSS33Q8NF86 280 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 KCNN1Q92952 543 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 PBXIP1Q96AQ6 731 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 C18orf25Q96B23 403 aaPredicted RBP17.1■□□□□ 0.33
CLK4-205ENST00000520199 FAM122AQ96E09 287 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 SNX27Q96L92 541 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 MYADMQ96S97 322 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 ADPGKQ9BRR6 497 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 RHOBTB2Q9BYZ6 727 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 NT5C3AQ9H0P0 336 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 NR2E1Q9Y466 385 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 CFAP54Q96N23 3096 aa17.1■□□□□ 0.33
CLK4-205ENST00000520199 BRCC3P46736 316 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 NCKAP1LP55160 1127 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 KARSQ15046 597 aaKnown RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 ZNF568Q3ZCX4 644 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 TMEM87AQ8NBN3 555 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 EPSTI1Q96J88 318 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 PHOX2BQ99453 314 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 REEP2Q9BRK0 252 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 TTPALQ9BTX7 342 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 MRPL4Q9BYD3 311 aaKnown RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 UPF2Q9HAU5 1272 aaKnown RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 WDR6Q9NNW5 1121 aaKnown RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 SSX2IPQ9Y2D8 614 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.09■□□□□ 0.33
CLK4-205ENST00000520199 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.331e-14■■■■■ 94.8
CLK4-205ENST00000520199 COL4A3Q01955 1670 aa17.09■□□□□ 0.33
CLK4-205ENST00000520199 NR1I2O75469 434 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 C1RP00736 705 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 KCNE1P15382 129 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 PLCG1P19174 1290 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 SYT1P21579 422 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 TKTP29401 623 aaKnown RBP17.08■□□□□ 0.32
CLK4-205ENST00000520199 ZNF131P52739 623 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 MCM6Q14566 821 aa17.08■□□□□ 0.32
CLK4-205ENST00000520199 TMEM132AQ24JP5 1023 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms