RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 AFG1LQ8WV93 481 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 HNRNPLLQ8WVV9 542 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 SEPT8Q92599 483 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CLP1Q92989 425 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 CDCA3Q99618 268 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 OSBPL6Q9BZF3 934 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ADAMTS10Q9H324 1103 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 RGS18Q9NS28 235 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 HSFX1Q9UBD0 423 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SSX2IPQ9Y2D8 614 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 USP20Q9Y2K6 914 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MYO9BQ13459 2157 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 NOP56O00567 594 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 DYNC1LI2O43237 492 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 ADCY6O43306 1168 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ATP9BO43861 1147 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 LARGE1O95461 756 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 STAU1O95793 577 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCNE2O96020 404 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MYOGP15173 224 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 EIF2AK2P19525 551 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 GJB2P29033 226 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TCF7P36402 384 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 ABCG1P45844 678 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SARSP49591 514 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 NRLP54845 237 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SP2Q02086 613 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 DCAF4L1Q3SXM0 396 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 GNASQ5JWF2 1037 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZNF787Q6DD87 383 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 USP17L6PQ6QN14 398 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZPBP2Q6X784 338 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MMP21Q8N119 569 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 C7orf31Q8N865 590 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SPATA20Q8TB22 786 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TBC1D5Q92609 795 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZNF689Q96CS4 500 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 UROC1Q96N76 676 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MRPL9Q9BYD2 267 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 UNC45AQ9H3U1 944 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 PLEKHA5Q9HAU0 1116 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 VPS54Q9P1Q0 977 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 KANSL3Q9P2N6 904 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCDC39Q9UFE4 941 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 PCDHA12Q9UN75 941 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 BOLA1Q9Y3E2 137 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 FNDC1Q4ZHG4 1894 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 BRWD1Q9NSI6 2320 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 DNAH14Q0VDD8 3507 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 NLRC5Q86WI3 1866 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ARHGEF37A1IGU5 675 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 N4BP3O15049 544 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 GPR32O75388 356 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 F13A1P00488 732 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SPATA31C1P0DKV0 1188 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ARP10275 920 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TOB1P50616 345 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 NCKAP1LP55160 1127 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 AMPD3Q01432 767 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 PPFIA1Q13136 1202 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TDGQ13569 410 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 KCNB1Q14721 858 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 SURF1Q15526 300 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 FBXO47Q5MNV8 452 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 STPG1Q5TH74 334 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ANO1Q5XXA6 986 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 PCSK4Q6UW60 755 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 DTHD1Q6ZMT9 781 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 LRRC8DQ7L1W4 858 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CHST3Q7LGC8 479 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCDC83Q8IWF9 413 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ZC3H3Q8IXZ2 948 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 DHX38Q92620 1227 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 C7orf25Q9BPX7 421 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 MYL10Q9BUA6 226 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CELF4Q9BZC1 486 aaKnown RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 CCDC113Q9H0I3 377 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ATP6V0A4Q9HBG4 840 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 CYP26B1Q9NR63 512 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 PRMT7Q9NVM4 692 aaPredicted RBP3.14□□□□□ -1.91
MCF2-208ENST00000519895 DACT1Q9NYF0 836 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.14□□□□□ -1.91
MCF2-208ENST00000519895 HPSEQ9Y251 543 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 ADGRG1Q9Y653 693 aa3.14□□□□□ -1.91
MCF2-208ENST00000519895 KAT6AQ92794 2004 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SERINC4A6NH21 518 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 M0QZ92 97 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SLITRK3O94933 977 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 KIF20AO95235 890 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 AMHP03971 560 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 C6orf222P0C671 652 aaPredicted RBP3.13□□□□□ -1.91
MCF2-208ENST00000519895 ZNF806P0C7X5 589 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 ATP4AP20648 1035 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SYT1P21579 422 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 PROZP22891 400 aa3.13□□□□□ -1.91
MCF2-208ENST00000519895 SFPQP23246 707 aaKnown RBP eCLIP3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms