RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 TPCN1Q9ULQ1 816 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 RNF112Q9ULX5 631 aa8.18□□□□□ -1.1
CLK4-202ENST00000519132 SHISA8B8ZZ34 492 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 ITGA8P53708 1063 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 LACTBP83111 547 aaPredicted RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 POU5F1Q01860 360 aaKnown RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 SURF1Q15526 300 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 ZNF772Q68DY9 489 aaPredicted RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 CHSY3Q70JA7 882 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 ESX1Q8N693 406 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 MARCH10Q8NA82 808 aaPredicted RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 ZNF527Q8NB42 609 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 KCT2Q8NC54 265 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 PCDHB1Q9Y5F3 818 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 TERTO14746 1132 aaKnown RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 KCNQ3O43525 872 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 ZNF543Q08ER8 600 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 MAEAQ7L5Y9 396 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 TTC30AQ86WT1 665 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.17□□□□□ -1.1
CLK4-202ENST00000519132 AGO4Q9HCK5 861 aaKnown RBP8.17□□□□□ -1.1
CLK4-202ENST00000519132 TMOD3Q9NYL9 352 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 LRFN1Q9P244 771 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 PTPRCP08575 1304 aa8.17□□□□□ -1.1
CLK4-202ENST00000519132 CTSSP25774 331 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 CASP2P42575 452 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 ATF7IPQ6VMQ6 1270 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 TTC5Q8N0Z6 440 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 SHISA5Q8N114 240 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 GOLGA6L1Q8N7Z2 621 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 FMNL2Q96PY5 1086 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 MAGEH1Q9H213 219 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 MRGBPQ9NV56 204 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 STK32BQ9NY57 414 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 PAXBP1Q9Y5B6 917 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 TJP1Q07157 1748 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 PAPLNO95428 1278 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 TPP2P29144 1249 aaPredicted RBP8.16□□□□□ -1.1
CLK4-202ENST00000519132 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
CLK4-202ENST00000519132 KCNAB2Q13303 367 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 DACT2Q5SW24 774 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 FOXR1Q6PIV2 292 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 SLCO4C1Q6ZQN7 724 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 KLHDC4Q8TBB5 520 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 MYL10Q9BUA6 226 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 FBXO2Q9UK22 296 aaPredicted RBP8.16□□□□□ -1.1
CLK4-202ENST00000519132 BTAF1O14981 1849 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 CCT5P48643 541 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 UGT8Q16880 541 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 HHIPL2Q6UWX4 724 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 FRMD7Q6ZUT3 714 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.16□□□□□ -1.1
CLK4-202ENST00000519132 NRG4Q8WWG1 115 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 STK31Q9BXU1 1019 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 TMPRSS11EQ9UL52 423 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 ISY1Q9ULR0 285 aaKnown RBP8.16□□□□□ -1.1
CLK4-202ENST00000519132 RGS12O14924 1447 aa8.16□□□□□ -1.1
CLK4-202ENST00000519132 PXDNLA1KZ92 1463 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 RREB1Q92766 1687 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.15□□□□□ -1.1
CLK4-202ENST00000519132 HIP1RO75146 1068 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 TNFRSF6BO95407 300 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 SNRPA1P09661 255 aaKnown RBP8.15□□□□□ -1.1
CLK4-202ENST00000519132 BCRP11274 1271 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 JUPP14923 745 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 DUSP4Q13115 394 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 E2F5Q15329 346 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 CCDC157Q569K6 752 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 IZUMO3Q5VZ72 239 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 C16orf87Q6PH81 154 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 KSR1Q8IVT5 923 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 HSCBQ8IWL3 235 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 RNF152Q8N8N0 203 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 PHKBQ93100 1093 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 ACSS3Q9H6R3 686 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 LY75O60449 1722 aa8.15□□□□□ -1.1
CLK4-202ENST00000519132 COL5A3P25940 1745 aaPredicted RBP8.15□□□□□ -1.1
CLK4-202ENST00000519132 FAM234BA2RU67 622 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 FAM90A27PA6NNH2 459 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 ACKR2O00590 384 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 TIPRLO75663 272 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 INMTO95050 263 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 SLC39A6Q13433 755 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 CTR9Q6PD62 1173 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 CYP26C1Q6V0L0 522 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 KRT78Q8N1N4 520 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 PIGBQ92521 554 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 TRIM63Q969Q1 353 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 ZNF396Q96N95 335 aaPredicted RBP8.15□□□□□ -1.11
CLK4-202ENST00000519132 SEZ6LQ9BYH1 1024 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 API5Q9BZZ5 524 aaKnown RBP8.15□□□□□ -1.11
CLK4-202ENST00000519132 GSX1Q9H4S2 264 aaPredicted RBP8.15□□□□□ -1.11
CLK4-202ENST00000519132 ABCC4O15439 1325 aa8.15□□□□□ -1.11
CLK4-202ENST00000519132 PAMP19021 973 aa8.14□□□□□ -1.11
CLK4-202ENST00000519132 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
CLK4-202ENST00000519132 PPFIA1Q13136 1202 aa8.14□□□□□ -1.11
CLK4-202ENST00000519132 SLC9A5Q14940 896 aa8.14□□□□□ -1.11
CLK4-202ENST00000519132 C20orf194Q5TEA3 1177 aa8.14□□□□□ -1.11
CLK4-202ENST00000519132 SPOCD1Q6ZMY3 1216 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms