RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 LAMP2P13473 410 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 RFX1P22670 979 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 CCT6AP40227 531 aaKnown RBP10.55□□□□□ -0.72
SPIDR-202ENST00000517619 HTR4Q13639 388 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 NBR1Q14596 966 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 PPP2R5AQ15172 486 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 ECM1Q16610 540 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 LIN9Q5TKA1 542 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 SLC44A3Q8N4M1 653 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 LNX1Q8TBB1 728 aaPredicted RBP10.55□□□□□ -0.72
SPIDR-202ENST00000517619 GPR152Q8TDT2 470 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 PIK3R5Q8WYR1 880 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 CLSTN3Q9BQT9 956 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
SPIDR-202ENST00000517619 BHMT2Q9H2M3 363 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 WNT16Q9UBV4 365 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 NUMBLQ9Y6R0 609 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
SPIDR-202ENST00000517619 CCL16O15467 120 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 ADAM12O43184 909 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 C8AP07357 584 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 MUTP22033 750 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 FSHRP23945 695 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 FXR2P51116 673 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPIDR-202ENST00000517619 EFNA5P52803 228 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 NTHL1P78549 312 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 ELAVL2Q12926 359 aaKnown RBP10.54□□□□□ -0.72
SPIDR-202ENST00000517619 ANGPT1Q15389 498 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 DCAF4L1Q3SXM0 396 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 PPM1LQ5SGD2 360 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 ATF7IP2Q5U623 682 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 GRASPQ7Z6J2 395 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-202ENST00000517619 FAM184AQ8NB25 1140 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 DTWD2Q8NBA8 298 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 FBXO18Q8NFZ0 1043 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 KIFAP3Q92845 792 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 NKD2Q969F2 451 aaPredicted RBP10.54□□□□□ -0.72
SPIDR-202ENST00000517619 NXPE3Q969Y0 559 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 IFT74Q96LB3 600 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 TBC1D17Q9HA65 648 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 LRWD1Q9UFC0 647 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 NOL7Q9UMY1 257 aaKnown RBP10.54□□□□□ -0.72
SPIDR-202ENST00000517619 POLIQ9UNA4 740 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 PATJQ8NI35 1801 aa10.54□□□□□ -0.72
SPIDR-202ENST00000517619 ANHXE9PGG2 379 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 HNRNPA1P09651 372 aaKnown RBP eCLIP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 IGFBP6P24592 240 aaPredicted RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 OR1D2P34982 312 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 TRAPPC10P48553 1259 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 RBM25P49756 843 aaKnown RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 CLCNKBP51801 687 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 HMGN5P82970 282 aaKnown RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 NT5DC1Q5TFE4 455 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 PDXDC1Q6P996 788 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 C4orf32Q8N8J7 132 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 C3orf58Q8NDZ4 430 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 SLC7A14Q8TBB6 771 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 SNX29Q8TEQ0 813 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 FGF14Q92915 247 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 GOLGA2P5Q9HBQ8 144 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 KIAA1024Q9UPX6 916 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 ZFP37Q9Y6Q3 630 aaPredicted RBP10.53□□□□□ -0.72
SPIDR-202ENST00000517619 FANCMQ8IYD8 2048 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 PHLPP2Q6ZVD8 1323 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 DCHS1Q96JQ0 3298 aa10.53□□□□□ -0.72
SPIDR-202ENST00000517619 CCDC169A6NNP5 214 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 TMEM189-UBE2V1I3L0A0 370 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 I3L4J1 428 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 K7ERI5 159 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 B3GAT3O94766 335 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 FGFR3P22607 806 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 TKTP29401 623 aaKnown RBP10.52□□□□□ -0.73
SPIDR-202ENST00000517619 PEX3P56589 373 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 OSTNP61366 133 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 UPP1Q16831 310 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 ZNF568Q3ZCX4 644 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 SPECC1Q5M775 1068 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 AXDND1Q5T1B0 1012 aaPredicted RBP10.52□□□□□ -0.73
SPIDR-202ENST00000517619 PARM1Q6UWI2 310 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 APBB1IPQ7Z5R6 666 aaPredicted RBP10.52□□□□□ -0.73
SPIDR-202ENST00000517619 CEP120Q8N960 986 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 IGSF22Q8N9C0 903 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 FGF13Q92913 245 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 RPP25Q9BUL9 199 aaKnown RBP10.52□□□□□ -0.73
SPIDR-202ENST00000517619 RAB34Q9BZG1 259 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 CDT1Q9H211 546 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 SLC2A4RGQ9NR83 387 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 MTRRQ9UBK8 725 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 CDH7Q9ULB5 785 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 PCDHB6Q9Y5E3 794 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 CDY1Q9Y6F8 540 aa10.52□□□□□ -0.73
SPIDR-202ENST00000517619 PP2D1A8MPX8 630 aa10.51□□□□□ -0.73
SPIDR-202ENST00000517619 E9PMD0 336 aa10.51□□□□□ -0.73
SPIDR-202ENST00000517619 HIP1RO75146 1068 aa10.51□□□□□ -0.73
SPIDR-202ENST00000517619 XYLBO75191 536 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms