RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SPAG1Q07617 926 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 CYP24A1Q07973 514 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 ADAM9Q13443 819 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 STIM1Q13586 685 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 SNRNP35Q16560 246 aaKnown RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 SPATA1Q5VX52 437 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 FAM117BQ6P1L5 589 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 CHRDL2Q6WN34 429 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 GAS2L3Q86XJ1 694 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 HERC6Q8IVU3 1022 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 EFCAB13Q8IY85 973 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 RNF169Q8NCN4 708 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 ENOX1Q8TC92 643 aaKnown RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 ZNF516Q92618 1163 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 ACAP3Q96P50 834 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 PPP1R10Q96QC0 940 aaKnown RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 BPIFA3Q9BQP9 254 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 SRRTQ9BXP5 876 aaKnown RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 TRIM6Q9C030 488 aaPredicted RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 RSAD1Q9HA92 442 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 CBX8Q9HC52 389 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 SAMSN1Q9NSI8 373 aaKnown RBP10.76□□□□□ -0.69
CLN8-202ENST00000517514 CNTN3Q9P232 1028 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 PARP2Q9UGN5 583 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 GIT1Q9Y2X7 761 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 PCDHB7Q9Y5E2 793 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
CLN8-202ENST00000517514 SCN1AP35498 2009 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 SMIM28A0A1B0GU29 152 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 BICDL2A1A5D9 508 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 LCHNA4D1U4 455 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 EXOC3O60645 756 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 DDHD2O94830 711 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 LDHAP00338 332 aaKnown RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 NFICP08651 508 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 MYOGP15173 224 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 KCNJ6P48051 423 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 SCNN1GP51170 649 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 RABGGTBP53611 331 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 POU5F1Q01860 360 aaKnown RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 SOX4Q06945 474 aaPredicted RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 CDKAL1Q5VV42 579 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 CEP135Q66GS9 1140 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 FILIP1Q7Z7B0 1213 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 ZNF280BQ86YH2 543 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 CSGALNACT2Q8N6G5 542 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 CXorf38Q8TB03 319 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 PHOSPHO2Q8TCD6 241 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 SP7Q8TDD2 431 aaPredicted RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 PARD3BQ8TEW8 1205 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 PGBD4Q96DM1 585 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 RNPC3Q96LT9 517 aaKnown RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 CEP63Q96MT8 703 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 SLC9A7Q96T83 725 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 TSG101Q99816 390 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 CCDC94Q9BW85 323 aaPredicted RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 TMEM117Q9H0C3 514 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 CWH43Q9H720 699 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 RPF1Q9H9Y2 349 aaKnown RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 TOPORSQ9NS56 1045 aaPredicted RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 RBAKQ9NYW8 714 aaPredicted RBP10.75□□□□□ -0.69
CLN8-202ENST00000517514 CACNG4Q9UBN1 327 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 DACH1Q9UI36 760 aa10.75□□□□□ -0.69
CLN8-202ENST00000517514 PLXNA4Q9HCM2 1894 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 ATG2AQ2TAZ0 1938 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 REV3LO60673 3130 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 ZNF233A6NK53 670 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 LRRIQ3A6PVS8 624 aaPredicted RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 CETN3O15182 167 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 MAPK13O15264 365 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 ATP2A2P16615 1042 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 ZNF18P17022 549 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 RPL13P26373 211 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 PBX2P40425 430 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 ZNF165P49910 485 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 GUCY2FP51841 1108 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 MARSP56192 900 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 CLDN10P78369 228 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 DSC1Q08554 894 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 PSMD6Q15008 389 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 NOMO2Q5JPE7 1267 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 GLRA4Q5JXX5 417 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 LMBRD2Q68DH5 695 aaPredicted RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 JADE1Q6IE81 842 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 CD300LGQ6UXG3 332 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 APTXQ7Z2E3 356 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 APBB1IPQ7Z5R6 666 aaPredicted RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 SPRED2Q7Z698 418 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 FAM186BQ8IYM0 893 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 TDHQ8IZJ6 230 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 AOPEPQ8N6M6 819 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 OR5B17Q8NGF7 314 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 NOC3LQ8WTT2 800 aaKnown RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 C18orf25Q96B23 403 aaPredicted RBP10.74□□□□□ -0.69
CLN8-202ENST00000517514 MKNK1Q9BUB5 465 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 PLEKHA5Q9HAU0 1116 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 KIAA1586Q9HCI6 787 aa10.74□□□□□ -0.69
CLN8-202ENST00000517514 TBC1D13Q9NVG8 400 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms