RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SEPT14Q6ZU15 432 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 KIAA0825Q8IV33 1275 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 MFN1Q8IWA4 741 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 RNF168Q8IYW5 571 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 LRRC57Q8N9N7 239 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GLIS3Q8NEA6 775 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PRCCQ92733 491 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TTC17Q96AE7 1141 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 NSL1Q96IY1 281 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM109Q9BVC6 243 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 NEUROG2Q9H2A3 272 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 RANBP17Q9H2T7 1088 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 RNPEPL1Q9HAU8 725 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GOLGA8IPA6NC78 632 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GOLGA8JA6NMD2 632 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 COPEO14579 308 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 HNRNPDLO14979 420 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 AHCYL1O43865 530 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 ATP8B3O60423 1300 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 KRT37O76014 449 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 UNC5CO95185 931 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 ABCD1P33897 745 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 MMP14P50281 582 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 MTFR1Q15390 333 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 P3H1Q32P28 736 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TRIM72Q6ZMU5 477 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 CRLF3Q8IUI8 442 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TTC13Q8NBP0 860 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 GINM1Q9NU53 330 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.07□□□□□ -1.285e-7■■■□□ 17.3
CPNE3-203ENST00000517490 RGL1Q9NZL6 768 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 NEU2Q9Y3R4 380 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 CASZ1Q86V15 1759 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 SCNN1DP51172 638 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 ZNF268Q14587 947 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 PIGWQ7Z7B1 504 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 ERICH1Q86X53 443 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 C4orf33Q8N1A6 199 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 RBBP8NLQ8NC74 664 aaPredicted RBP7.07□□□□□ -1.28
CPNE3-203ENST00000517490 KMT5AQ9NQR1 393 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM59LQ9UK28 342 aa7.07□□□□□ -1.28
CPNE3-203ENST00000517490 MCF2LO15068 1137 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 LPXNO60711 386 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 NOL3O60936 208 aaKnown RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 BBOX1O75936 387 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ARSEP51690 589 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 NLRP9Q7RTR0 991 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MAB21L3Q8N8X9 362 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 CYTH2Q99418 400 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 TSSK1BQ9BXA7 367 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 OLFML3Q9NRN5 406 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 AGPAT3Q9NRZ7 376 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 CYP39A1Q9NYL5 469 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 NARFQ9UHQ1 456 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 GPR75-ASB3A0A0A6YYF3 556 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 DCDC2CA8MYV0 355 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ABLIM1O14639 778 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 CD19P15391 556 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 TMPRSS15P98073 1019 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 DNAL1Q4LDG9 190 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ZC2HC1CQ53FD0 456 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MFSD5Q6N075 450 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 IRGCQ6NXR0 463 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 FBXL13Q8NEE6 735 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RNF25Q96BH1 459 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 PI4KBQ9UBF8 816 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 IP6K2Q9UHH9 426 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RPL26L1Q9UNX3 145 aaKnown RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 SLC12A4Q9UP95 1085 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 NAALADL1Q9UQQ1 740 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 LRCH1Q9Y2L9 728 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ACTL7BQ9Y614 415 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 HARSP12081 509 aaKnown RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MYCLP12524 364 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ATP4AP20648 1035 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 UBXN2AP68543 259 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 BASP1P80723 227 aaKnown RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RRP1BQ14684 758 aaKnown RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RCN1Q15293 331 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 HIF1AQ16665 826 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 LVRNQ6Q4G3 990 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 TMEM179Q6ZVK1 233 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 MCF2L2Q86YR7 1114 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RFX6Q8HWS3 928 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 TAB3Q8N5C8 712 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 PIP4K2CQ8TBX8 421 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 DTX3LQ8TDB6 740 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ART4Q93070 314 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 HAUS1Q96CS2 278 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RUSC1Q9BVN2 902 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 KCTD10Q9H3F6 313 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 CASQ2O14958 399 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 ATMINO43313 823 aaPredicted RBP7.06□□□□□ -1.28
CPNE3-203ENST00000517490 RNF8O76064 485 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 KLRK1P26718 216 aa7.06□□□□□ -1.28
CPNE3-203ENST00000517490 BNIP1Q12981 228 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms