RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 CDT1Q9H211 546 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 IKZF4Q9H2S9 585 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 BRMS1Q9HCU9 246 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 PTPRHQ9HD43 1115 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 DDX19AQ9NUU7 478 aaKnown RBP9.55□□□□□ -0.88
PABPC1-202ENST00000517403 DZANK1Q9NVP4 752 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 HCFC1R1Q9NWW0 138 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 PARP2Q9UGN5 583 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 ADAM28Q9UKQ2 775 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 SORCS3Q9UPU3 1222 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 GDAQ9Y2T3 454 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 GIT1Q9Y2X7 761 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 CLUHO75153 1309 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 CITO14578 2027 aa9.55□□□□□ -0.88
PABPC1-202ENST00000517403 SHISA7A6NL88 538 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 H0Y858 1186 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 MAP3K7O43318 606 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 HIP1RO75146 1068 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 LRRN2O75325 713 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 URODP06132 367 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 CCT6AP40227 531 aaKnown RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 MTHFRP42898 656 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 NAMPTP43490 491 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 TFDP1Q14186 410 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 HSP90AA2PQ14568 343 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 ZBTB41Q5SVQ8 909 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 SCARA3Q6AZY7 606 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 LNX1Q8TBB1 728 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 RIN2Q8WYP3 895 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 ZBTB45Q96K62 511 aaPredicted RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 PLIN2Q99541 437 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 LLPHQ9BRT6 129 aaKnown RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 MRPL17Q9NRX2 175 aaKnown RBP9.54□□□□□ -0.88
PABPC1-202ENST00000517403 ARHGAP28Q9P2N2 729 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 FBXW11Q9UKB1 542 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
PABPC1-202ENST00000517403 ZMYM2Q9UBW7 1377 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 CCDC195A0A1B0GUA6 201 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 ARHGEF35A5YM69 484 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 ACKR2O00590 384 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 VNN2O95498 520 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 ALDH2P05091 517 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 XRCC6P12956 609 aaKnown RBP eCLIP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 PROZP22891 400 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 TKTP29401 623 aaKnown RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 NPTX2P47972 431 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 RAD51AP2Q09MP3 1159 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 TUSC3Q13454 348 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 PRPF4BQ13523 1007 aaKnown RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 MTMR3Q13615 1198 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 CES5AQ6NT32 575 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 CCDC149Q6ZUS6 474 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 C1orf186Q6ZWK4 172 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 ASCL5Q7RTU5 278 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 CMASQ8NFW8 434 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 SNX29Q8TEQ0 813 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 C18orf25Q96B23 403 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 TMX3Q96JJ7 454 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 NECTIN4Q96NY8 510 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 TARS2Q9BW92 718 aaKnown RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 TMEM121BQ9BXQ6 578 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 NT5C3AQ9H0P0 336 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 KCNK12Q9HB15 430 aa9.53□□□□□ -0.88
PABPC1-202ENST00000517403 WDR6Q9NNW5 1121 aaKnown RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 PRMT7Q9NVM4 692 aaPredicted RBP9.53□□□□□ -0.88
PABPC1-202ENST00000517403 CFAP54Q96N23 3096 aa9.52□□□□□ -0.88
PABPC1-202ENST00000517403 FSD2A1L4K1 749 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 TISP43B9A030 160 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 PPEF2O14830 753 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FAM189A1O60320 539 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 GLUD1P00367 558 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 SRGAP2BP0DMP2 458 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 GLULP15104 373 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 CLCNKBP51801 687 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 GUCY2FP51841 1108 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 PEX3P56589 373 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 OSTNP61366 133 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-202ENST00000517403 HTR4Q13639 388 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 TRIM29Q14134 588 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 SLC5A9Q2M3M2 681 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 TMEM119Q4V9L6 283 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 ARSHQ5FYA8 562 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 XKR4Q5GH76 650 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 FAM171A1Q5VUB5 890 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 ERICH6BQ5W0A0 696 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 RINT1Q6NUQ1 792 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 SLC39A4Q6P5W5 647 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 ALKAL1Q6UXT8 129 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 C15orf39Q6ZRI6 1047 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 GET4Q7L5D6 327 aaPredicted RBP9.52□□□□□ -0.89
PABPC1-202ENST00000517403 CNNM3Q8NE01 707 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 MCPH1Q8NEM0 835 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 DEPTORQ8TB45 409 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 ITFG1Q8TB96 612 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 PIK3R5Q8WYR1 880 aa9.52□□□□□ -0.89
PABPC1-202ENST00000517403 RSPH1Q8WYR4 309 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms