RNA–Protein interactions for RNA: ENST00000517126.1

RNU6-1220P-201, Transcript of RNA, U6 small nuclear 1220, pseudogene, humanhuman

BASIC

Gene RNU6-1220P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1220P-201ENST00000517126 C1SP09871 688 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 MTHFD1P11586 935 aaKnown RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 DDCP20711 480 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 EVA1CP58658 441 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NHLH2Q02577 135 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TOB2Q14106 344 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 RAB39AQ14964 217 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 PTPAQ15257 358 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 INAVAQ3KP66 663 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 GDF7Q7Z4P5 450 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TTC7BQ86TV6 843 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 PHACTR3Q96KR7 559 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TEKT5Q96M29 485 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 SLC2A13Q96QE2 648 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 LSM14BQ9BX40 385 aaKnown RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CCDC8Q9H0W5 538 aaPredicted RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NRDE2Q9H7Z3 1164 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CEP72Q9P209 647 aa4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CFAP20Q9Y6A4 193 aaKnown RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 MYBBP1AQ9BQG0 1328 aaKnown RBP4.42□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TMEM191CA6NGB0 347 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NPIPB8E9PQR5 432 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 FAM20BO75063 409 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 ABHD16AO95870 558 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 FSHBP01225 129 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 ALOX15P16050 662 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 GUCY1A2P33402 732 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NEK2P51955 445 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 PPP3CAQ08209 521 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 BRDTQ58F21 947 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 MFSD14BQ5SR56 506 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 OTUD7BQ6GQQ9 843 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 ZNF529Q6P280 563 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 KCNV1Q6PIU1 500 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 Q6ZVL8 140 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 GPRIN1Q7Z2K8 1008 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CBARPQ8N350 705 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 LILRA3Q8N6C8 439 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 RNF169Q8NCN4 708 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 REPS2Q8NFH8 660 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CEP95Q96GE4 821 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TMX3Q96JJ7 454 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 CPEB1Q9BZB8 566 aaKnown RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 ASPSCR1Q9BZE9 553 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 TRIM8Q9BZR9 551 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 RNPEPQ9H4A4 650 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 AASDHPPTQ9NRN7 309 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 RNF181Q9P0P0 153 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 POLHQ9Y253 713 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 LUC7L2Q9Y383 392 aaKnown RBP4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 NOX1Q9Y5S8 564 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 HS3ST3A1Q9Y663 406 aa4.41□□□□□ -1.7
RNU6-1220P-201ENST00000517126 KIAA0391O15091 583 aaKnown RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 RPS6KA4O75676 772 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 ITGB1P05556 798 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 GNAI3P08754 354 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 U2AF1L5P0DN76 240 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 C5AR1P21730 350 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 SMARCA1P28370 1054 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 GNAI1P63096 354 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 BLOC1S1P78537 153 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 U2AF1Q01081 240 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 PCBP2Q15366 365 aaKnown RBP eCLIP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 TMEM240Q5SV17 173 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 LRRC55Q6ZSA7 311 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 SEM1Q6ZVN7 128 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 ANKRD13AQ8IZ07 590 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 FITM2Q8N6M3 262 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 HOXB13Q92826 284 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 PUS7Q96PZ0 661 aaKnown RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 PRRX2Q99811 253 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 PACSIN1Q9BY11 444 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 C11orf54Q9H0W9 315 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 TMPRSS5Q9H3S3 457 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 LDAHQ9H6V9 325 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 CALCOCO1Q9P1Z2 691 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 FZD1Q9UP38 647 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 USP15Q9Y4E8 981 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 FPGT-TNNI3KV9GXZ4 949 aa4.4□□□□□ -1.71
RNU6-1220P-201ENST00000517126 SLC16A6O15403 523 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 ERN1O75460 977 aaKnown RBP4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 HAUS5O94927 633 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 PDGFRBP09619 1106 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 ALDH1A3P47895 512 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 AVPR1BP47901 424 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 RNASE9P60153 205 aaKnown RBP4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 CTXN1P60606 82 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 UBXN2BQ14CS0 331 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 CCDC157Q569K6 752 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 ANKS6Q68DC2 871 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 MED25Q71SY5 747 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 RHOT2Q8IXI1 618 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 FBXO18Q8NFZ0 1043 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 STON2Q8WXE9 905 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 DPF2Q92785 391 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 LENG9Q96B70 501 aa4.39□□□□□ -1.71
RNU6-1220P-201ENST00000517126 CLIP3Q96DZ5 547 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms