RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 POLR3GLQ9BT43 218 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 DPH1Q9BZG8 443 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 SEC61A2Q9H9S3 476 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 ATP6V0A4Q9HBG4 840 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 PIH1D1Q9NWS0 290 aaKnown RBP4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 FEZ2Q9UHY8 353 aaPredicted RBP4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 TAGLN3Q9UI15 199 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 CNOT6Q9ULM6 557 aaKnown RBP4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 KCTD3Q9Y597 815 aa4.11□□□□□ -1.75
RNU6-390P-201ENST00000516259 ABHD14A-ACY1A0A1B0GW23 586 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 CFAP69A5D8W1 941 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 TCAF2A6NFQ2 919 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 FFAR3O14843 346 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 ANXA1P04083 346 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 CYP1A1P04798 512 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 THP07101 528 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SETSIPP0DME0 302 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 EN2P19622 333 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SMARCA1P28370 1054 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 PRDX5P30044 214 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 GZMKP49863 264 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 MRPL49Q13405 166 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 PRR16Q569H4 304 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SYDE1Q6ZW31 735 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 RALYLQ86SE5 291 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 FAM124AQ86V42 546 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZNF761Q86XN6 746 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 PDSS2Q86YH6 399 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 ACRBPQ8NEB7 543 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 BRIX1Q8TDN6 353 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZNF526Q8TF50 670 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SGCZQ96LD1 299 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 UHRF1Q96T88 793 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 CDC5LQ99459 802 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SPATA25Q9BR10 227 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SENP6Q9GZR1 1112 aaPredicted RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 NELFAQ9H3P2 528 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 RSAD1Q9HA92 442 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SARS2Q9NP81 518 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 PLCB1Q9NQ66 1216 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 STARD7Q9NQZ5 370 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 CNNM1Q9NRU3 951 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 ING3Q9NXR8 418 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 MAGEL2Q9UJ55 1249 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 SMG5Q9UPR3 1016 aaKnown RBP4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 FAM50BQ9Y247 325 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 MED16Q9Y2X0 877 aa4.1□□□□□ -1.75
RNU6-390P-201ENST00000516259 A0A1W2PPL8 197 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 MROH6A6NGR9 719 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 B5MCH6 92 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 H3BUI4 141 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 SLC26A4O43511 780 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 MTHFD1P11586 935 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 PI3P19957 117 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 BPIFB4P59827 614 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 DHX8Q14562 1220 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 SSPNQ14714 243 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 SURF1Q15526 300 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZRSR2Q15696 482 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZNF568Q3ZCX4 644 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 PABPC1LQ4VXU2 614 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 CCDC157Q569K6 752 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ATG14Q6ZNE5 492 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 DOK3Q7L591 496 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 FRMD5Q7Z6J6 570 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 PLEKHH3Q7Z736 793 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 SRLQ86TD4 932 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZDHHC14Q8IZN3 488 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZGPATQ8N5A5 531 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 OR2C3Q8N628 320 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 POU5F2Q8N7G0 328 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 NLGN4YQ8NFZ3 816 aaPredicted RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 CFHR4Q92496 578 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 NMD3Q96D46 503 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 TMX3Q96JJ7 454 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 MRGPRX1Q96LB2 322 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 CCDC138Q96M89 665 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ARPC5LQ9BPX5 153 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 MRPL46Q9H2W6 279 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ZMAT3Q9HA38 289 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 TRMT13Q9NUP7 481 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 ABCF2Q9UG63 623 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 PUF60Q9UHX1 559 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 CLCA2Q9UQC9 943 aa4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 RBM8AQ9Y5S9 174 aaKnown RBP4.09□□□□□ -1.75
RNU6-390P-201ENST00000516259 RHPN2P1A8MT19 583 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 F2RL2O00254 374 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 SLC43A1O75387 559 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 SNRPA1P09661 255 aaKnown RBP4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 ZNF888P0CJ79 500 aaPredicted RBP4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 TYRP1P17643 537 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 PCSK1P29120 753 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 SERPINB3P29508 390 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 AFF3P51826 1226 aaKnown RBP4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 APBA1Q02410 837 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 TCF15Q12870 199 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 KIF22Q14807 665 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 CNGA2Q16280 664 aa4.08□□□□□ -1.76
RNU6-390P-201ENST00000516259 LONRF1Q17RB8 773 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms