RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 THNSL1Q8IYQ7 743 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 GPD1LQ8N335 351 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 RSPH1Q8WYR4 309 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 CBWD1Q9BRT8 395 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 FAM213AQ9BRX8 229 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 FUCA2Q9BTY2 467 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 THAP9Q9H5L6 903 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 ELAC1Q9H777 363 aaKnown RBP11.05□□□□□ -0.64
NEDD9-214ENST00000513989 PLEKHA5Q9HAU0 1116 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 METTL14Q9HCE5 456 aaKnown RBP11.05□□□□□ -0.64
NEDD9-214ENST00000513989 TOPORSQ9NS56 1045 aaPredicted RBP11.05□□□□□ -0.64
NEDD9-214ENST00000513989 DMAC2Q9NW81 257 aa11.05□□□□□ -0.64
NEDD9-214ENST00000513989 C5orf42Q9H799 3197 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 TTLL13PA6NNM8 815 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 MAPK13O15264 365 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 SLC16A3O15427 465 aaKnown RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 PRKCSHP14314 528 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 GRM5P41594 1212 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 ZCWPW2Q504Y3 356 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 EEF1DP3Q658K8 133 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 SLC39A4Q6P5W5 647 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 INTS8Q75QN2 995 aaKnown RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 MRPL10Q7Z7H8 261 aaKnown RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 CDR2LQ86X02 465 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 ABI1Q8IZP0 508 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 RDH13Q8NBN7 331 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 FAM200AQ8TCP9 573 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 FNBP1Q96RU3 617 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 TSPAN18Q96SJ8 248 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 CDT1Q9H211 546 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 KANSL3Q9P2N6 904 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 THEGQ9P2T0 379 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 GIT1Q9Y2X7 761 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 IPPQ9Y573 584 aa11.04□□□□□ -0.64
NEDD9-214ENST00000513989 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.04□□□□□ -0.64
NEDD9-214ENST00000513989 TRIM49BA6NDI0 452 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 C9IYK1 514 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 STX10O60499 249 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 IL18RAPO95256 599 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 IBSPP21815 317 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 IGFBP4P22692 258 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ACOT2P49753 483 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 PMS1P54277 932 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 OSTNP61366 133 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ENPEPQ07075 957 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 SPAG1Q07617 926 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 CCDC40Q4G0X9 1142 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 GLB1LQ6UWU2 654 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 C11orf57Q6ZUT1 292 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 FRMD5Q7Z6J6 570 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 TMCO2Q7Z6W1 182 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 RTN4RL1Q86UN2 441 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ECHDC2Q86YB7 292 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 FAM186BQ8IYM0 893 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 RNF169Q8NCN4 708 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 CACTINQ8WUQ7 758 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ATXN2LQ8WWM7 1075 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 FAM212AQ96EL1 285 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 SAAL1Q96ER3 474 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 FBXL18Q96ME1 805 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ASB2Q96Q27 587 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 DUSP9Q99956 384 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 APOL6Q9BWW8 343 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 EIF2AQ9BY44 585 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 TMEM161AQ9NX61 479 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 SNTG2Q9NY99 539 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 RBAKQ9NYW8 714 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 ARMCX3Q9UH62 379 aaPredicted RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 R3HCC1Q9Y3T6 440 aaKnown RBP11.03□□□□□ -0.64
NEDD9-214ENST00000513989 NFE2L3Q9Y4A8 694 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 WDR81Q562E7 1941 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 TRIOO75962 3097 aa11.03□□□□□ -0.64
NEDD9-214ENST00000513989 LCHNA4D1U4 455 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 GOLGA8IPA6NC78 632 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 GOLGA8JA6NMD2 632 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 TISP43B9A030 160 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 ABLIM1O14639 778 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 XPOTO43592 962 aaKnown RBP11.02□□□□□ -0.65
NEDD9-214ENST00000513989 MGEA5O60502 916 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 LPXNO60711 386 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 EDN1P05305 212 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 POU3F3P20264 500 aaPredicted RBP11.02□□□□□ -0.65
NEDD9-214ENST00000513989 AP3M2P53677 418 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 TAP1Q03518 808 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 PPP2R3AQ06190 1150 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 UBXN11Q5T124 520 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 NPAS4Q8IUM7 802 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 HERC6Q8IVU3 1022 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 ZC3H3Q8IXZ2 948 aaKnown RBP11.02□□□□□ -0.65
NEDD9-214ENST00000513989 AOPEPQ8N6M6 819 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 PHOSPHO2Q8TCD6 241 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 URGCPQ8TCY9 931 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 MFSD14AQ96MC6 490 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 SLC9A7Q96T83 725 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 IKZF4Q9H2S9 585 aa11.02□□□□□ -0.65
NEDD9-214ENST00000513989 ASB7Q9H672 318 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms