RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 PLA2G4FQ68DD2 849 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 GSTCDQ8NEC7 633 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 BICD2Q8TD16 824 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 PSPC1Q8WXF1 523 aaKnown RBP10.02□□□□□ -0.8
CAST-239ENST00000513666 SLC7A3Q8WY07 619 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 PIK3R5Q8WYR1 880 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 DNASE1L2Q92874 299 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 CCDC51Q96ER9 411 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 PLA2G2FQ9BZM2 168 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 SH2B1Q9NRF2 756 aaPredicted RBP10.02□□□□□ -0.8
CAST-239ENST00000513666 POLIQ9UNA4 740 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 GIT1Q9Y2X7 761 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 HES2Q9Y543 173 aa10.02□□□□□ -0.8
CAST-239ENST00000513666 SF3B1O75533 1304 aaKnown RBP eCLIP10.02□□□□□ -0.87e-6■■■■■ 52.4
CAST-239ENST00000513666 ANKRD11Q6UB99 2663 aaPredicted RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 ZMYM2Q9UBW7 1377 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 MAN2B1O00754 1011 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 TSPAN1O60635 241 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 ERLIN2O94905 339 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 CCR3P51677 355 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 RCAN1P53805 252 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 PSMC5P62195 406 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 EXOSC10Q01780 885 aaKnown RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 SIM2Q14190 667 aaPredicted RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 PCBP1Q15365 356 aaKnown RBP eCLIP10.02□□□□□ -0.81
CAST-239ENST00000513666 PSMD5Q16401 504 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 Q4G0T1 1027 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 PABPC1LQ4VXU2 614 aaKnown RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 EXOC8Q8IYI6 725 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 LNX1Q8TBB1 728 aaPredicted RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 SLC7A14Q8TBB6 771 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 ING5Q8WYH8 240 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 TMEM143Q96AN5 459 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 TTPALQ9BTX7 342 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 CSRNP2Q9H175 543 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 HCFC1R1Q9NWW0 138 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 GDE1Q9NZC3 331 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 DNMT3BQ9UBC3 853 aaKnown RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 NDRG2Q9UN36 371 aaKnown RBP10.02□□□□□ -0.81
CAST-239ENST00000513666 PPME1Q9Y570 386 aa10.02□□□□□ -0.81
CAST-239ENST00000513666 ZFYVE26Q68DK2 2539 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 COL4A2P08572 1712 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 FASNP49327 2511 aaKnown RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 KLF18A0A0U1RQI7 1052 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 ASAP2O43150 1006 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 TADA2AO75478 443 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 PROS1P07225 676 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 ADD1P35611 737 aaKnown RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 RFC5P40937 340 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 LIMK1P53667 647 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 NPEPPSP55786 919 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 GRIK3Q13003 919 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 HSP90AA2PQ14568 343 aaPredicted RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 ACAP1Q15027 740 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 UVSSAQ2YD98 709 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 AXDND1Q5T1B0 1012 aaPredicted RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 IL31Q6EBC2 164 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 HACE1Q8IYU2 909 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 RNF149Q8NC42 400 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 RABGGTAQ92696 567 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 ELSPBP1Q96BH3 223 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 MCRS1Q96EZ8 462 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 TCEANC2Q96MN5 208 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 APOL6Q9BWW8 343 aa10.01□□□□□ -0.81
CAST-239ENST00000513666 NXF3Q9H4D5 531 aaKnown RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 MRPS23Q9Y3D9 190 aaKnown RBP10.01□□□□□ -0.81
CAST-239ENST00000513666 ZZEF1O43149 2961 aa10□□□□□ -0.81
CAST-239ENST00000513666 TM4SF5O14894 197 aa10□□□□□ -0.81
CAST-239ENST00000513666 ADAM12O43184 909 aa10□□□□□ -0.81
CAST-239ENST00000513666 PRPF3O43395 683 aaKnown RBP10□□□□□ -0.81
CAST-239ENST00000513666 CNR2P34972 360 aa10□□□□□ -0.81
CAST-239ENST00000513666 NCBP1Q09161 790 aaKnown RBP10□□□□□ -0.81
CAST-239ENST00000513666 FAM171A1Q5VUB5 890 aa10□□□□□ -0.81
CAST-239ENST00000513666 TANGO2Q6ICL3 276 aa10□□□□□ -0.81
CAST-239ENST00000513666 PDXDC1Q6P996 788 aa10□□□□□ -0.81
CAST-239ENST00000513666 RTL10Q7L3V2 364 aa10□□□□□ -0.81
CAST-239ENST00000513666 FERMT3Q86UX7 667 aa10□□□□□ -0.81
CAST-239ENST00000513666 SPRYD3Q8NCJ5 442 aa10□□□□□ -0.81
CAST-239ENST00000513666 CCDC148Q8NFR7 591 aa10□□□□□ -0.81
CAST-239ENST00000513666 TCP11Q8WWU5 503 aa10□□□□□ -0.81
CAST-239ENST00000513666 CPB2Q96IY4 423 aa10□□□□□ -0.81
CAST-239ENST00000513666 CEP170P1Q96L14 293 aa10□□□□□ -0.81
CAST-239ENST00000513666 KCNK17Q96T54 332 aa10□□□□□ -0.81
CAST-239ENST00000513666 TRIM6Q9C030 488 aaPredicted RBP10□□□□□ -0.81
CAST-239ENST00000513666 LMAN1LQ9HAT1 526 aa10□□□□□ -0.81
CAST-239ENST00000513666 AVENQ9NQS1 362 aaPredicted RBP10□□□□□ -0.81
CAST-239ENST00000513666 VWA8A3KMH1 1905 aa10□□□□□ -0.81
CAST-239ENST00000513666 GREB1Q4ZG55 1949 aa10□□□□□ -0.81
CAST-239ENST00000513666 CYP3A7-CYP3A51PA0A087WV96 503 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 CCDC196A0A1B0GTZ2 297 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 DKC1O60832 514 aaKnown RBP eCLIP9.99□□□□□ -0.81
CAST-239ENST00000513666 FCARP24071 287 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 CYP3A7P24462 503 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 AKAP5P24588 427 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 QARSP47897 775 aaKnown RBP9.99□□□□□ -0.81
CAST-239ENST00000513666 CXCL12P48061 93 aa9.99□□□□□ -0.81
CAST-239ENST00000513666 PTENP60484 403 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms