RNA–Protein interactions for RNA: ENST00000513284.5

RNF4-218, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-218ENST00000513284 CYP3A7-CYP3A51PA0A087WV96 503 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 GOLGA8AA7E2F4 631 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 GOLGA8BA8MQT2 603 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 KIF4AO95239 1232 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 KCNK5O95279 499 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 TDP2O95551 362 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 RHOP08100 348 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 ARF4P18085 180 aaPredicted RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 CYP3A7P24462 503 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 OR1D2P34982 312 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 PSMC5P62195 406 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 HSP90AA2PQ14568 343 aaPredicted RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 NAB2Q15742 525 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 FAM78AQ5JUQ0 283 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 PRSS36Q5K4E3 855 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 IL31Q6EBC2 164 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 CEP57Q86XR8 500 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 ETNPPLQ8TBG4 499 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 PSPC1Q8WXF1 523 aaKnown RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 TCEAL4Q96EI5 215 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 ZSWIM3Q96MP5 696 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 JPH2Q9BR39 696 aaPredicted RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 IER2Q9BTL4 223 aa12.47□□□□□ -0.41
RNF4-218ENST00000513284 LSM14BQ9BX40 385 aaKnown RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 AVENQ9NQS1 362 aaPredicted RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 BMP2KQ9NSY1 1161 aaPredicted RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 DSPP15924 2871 aaKnown RBP12.47□□□□□ -0.41
RNF4-218ENST00000513284 PKD1L2Q7Z442 2459 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 NCANO14594 1321 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 SF3B1O75533 1304 aaKnown RBP eCLIP12.46□□□□□ -0.411e-6■■■■■ 109.1
RNF4-218ENST00000513284 AXIN1O15169 862 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 PRPF3O43395 683 aaKnown RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 TOP3BO95985 862 aaKnown RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 ZNF806P0C7X5 589 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 GNA11P29992 359 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 AXLP30530 894 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 CNR2P34972 360 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 CCR2P41597 374 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 GRIK3Q13003 919 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 HEATR6Q6AI08 1181 aaKnown RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 NOTUMQ6P988 496 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 CD300LGQ6UXG3 332 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 VITQ6UXI7 678 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 UNQ6494/PRO21346Q6UXR6 183 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 LONP2Q86WA8 852 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 SPEM1Q8N4L4 309 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 CEP170P1Q96L14 293 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 TRMT61BQ9BVS5 477 aaKnown RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 ARRDC1-AS1Q9H2J1 176 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 BRD9Q9H8M2 597 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 TRPV5Q9NQA5 729 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 XPNPEP1Q9NQW7 623 aa12.46□□□□□ -0.41
RNF4-218ENST00000513284 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
RNF4-218ENST00000513284 VWA8A3KMH1 1905 aa12.46□□□□□ -0.42
RNF4-218ENST00000513284 KLF18A0A0U1RQI7 1052 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 CASTOR2A6NHX0 329 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 ARNTLO00327 626 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 PTGESO14684 152 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 GIPC1O14908 333 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 ASAP2O43150 1006 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 B4GALT5O43286 388 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
RNF4-218ENST00000513284 MOSPD3O75425 235 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 PAPSS2O95340 614 aaPredicted RBP12.45□□□□□ -0.42
RNF4-218ENST00000513284 CCNE1P24864 410 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
RNF4-218ENST00000513284 MBTD1Q05BQ5 628 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 PTGDRQ13258 359 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 PPP2R5DQ14738 602 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 ADCK5Q3MIX3 580 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 DHX32Q7L7V1 743 aaKnown RBP12.45□□□□□ -0.42
RNF4-218ENST00000513284 TBCKQ8TEA7 893 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 SLC7A3Q8WY07 619 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 ASB16Q96NS5 453 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 IGF2RP11717 2491 aa12.45□□□□□ -0.42
RNF4-218ENST00000513284 A0A1B0GUA9 196 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 ERLIN2O94905 339 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 NPTXRO95502 500 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 PTPN2P17706 415 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 SPINK2P20155 84 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 FGFR3P22607 806 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 GDI1P31150 447 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 VIPR2P41587 438 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 RAP1GAPP47736 663 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 TUSC3Q13454 348 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 NTRK3Q16288 839 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 AASDHQ4L235 1098 aaPredicted RBP12.44□□□□□ -0.42
RNF4-218ENST00000513284 PLA2G2CQ5R387 149 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 Q6ZS52 159 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 RTL10Q7L3V2 364 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 RASEFQ8IZ41 740 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 SMOC1Q9H4F8 434 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 ZFP14Q9HCL3 533 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 MTRRQ9UBK8 725 aa12.44□□□□□ -0.42
RNF4-218ENST00000513284 VAV3Q9UKW4 847 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms