RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 WDR27A2RRH5 827 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 MYBPHLA2RUH7 354 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SPECC1L-ADORA2AF8WAN1 911 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 RHOBTB1O94844 696 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 MX1P20591 662 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 MLH1P40692 756 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SCNN1GP51170 649 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SEMA3BQ13214 749 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 PON2Q15165 354 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 PSMD5Q16401 504 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SYNPOQ8N3V7 929 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SMARCD2Q92925 531 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 RRP36Q96EU6 259 aaKnown RBP10.74□□□□□ -0.69
PTPN20-228ENST00000513266 PGBD1Q96JS3 809 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 FAM167AQ96KS9 214 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 ZFP42Q96MM3 310 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 SPZ1Q9BXG8 430 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 C8orf33Q9H7E9 229 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-228ENST00000513266 POLR3BQ9NW08 1133 aaPredicted RBP10.74□□□□□ -0.69
PTPN20-228ENST00000513266 CACNG4Q9UBN1 327 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 GABBR1Q9UBS5 961 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 TSC2P49815 1807 aa10.74□□□□□ -0.69
PTPN20-228ENST00000513266 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 DOPEY2Q9Y3R5 2298 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 ARID2Q68CP9 1835 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 UPK3BL1B0FP48 263 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 UPK3BL2E5RIL1 263 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 HOXA11P31270 313 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-228ENST00000513266 RDXP35241 583 aaKnown RBP10.73□□□□□ -0.69
PTPN20-228ENST00000513266 CCR2P41597 374 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 KPNA1P52294 538 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-228ENST00000513266 RAB33AQ14088 237 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 ZNF423Q2M1K9 1284 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 MFSD6LQ8IWD5 586 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 CSGALNACT1Q8TDX6 532 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 RSPRY1Q96DX4 576 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 INO80BQ9C086 356 aaPredicted RBP10.73□□□□□ -0.69
PTPN20-228ENST00000513266 CLMPQ9H6B4 373 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 TRIP11Q15643 1979 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 SALL3Q9BXA9 1300 aa10.73□□□□□ -0.69
PTPN20-228ENST00000513266 MUC22E2RYF6 1773 aaPredicted RBP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 ATMQ13315 3056 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 ABCB7O75027 752 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 NR1I2O75469 434 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 OATP04181 439 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 PSAPP07602 524 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 ITGA4P13612 1032 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 PTPN2P17706 415 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 MAPK8P45983 427 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 CDC42EP1Q00587 391 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 TARBP2Q15633 366 aaKnown RBP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 PMS2CLQ68D20 193 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 ZNF746Q6NUN9 644 aaPredicted RBP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 RTL10Q7L3V2 364 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 ZNF410Q86VK4 478 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 KSR1Q8IVT5 923 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 HHIPQ96QV1 700 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 PAAF1Q9BRP4 392 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 TTPALQ9BTX7 342 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 CNNM2Q9H8M5 875 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 IFT122Q9HBG6 1241 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 SEC63Q9UGP8 760 aaKnown RBP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 SLC8A2Q9UPR5 921 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 SF3B1O75533 1304 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPN20-228ENST00000513266 PCDH15Q96QU1 1955 aa10.72□□□□□ -0.69
PTPN20-228ENST00000513266 MGAQ8IWI9 3026 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 A0A087WV48 116 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 IGKV6-21A0A0C4DH24 114 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 HEPACAM2A8MVW5 462 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 MYO9AB2RTY4 2548 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 FAM86B1E9PN63 330 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 IPO5O00410 1097 aaKnown RBP10.71□□□□□ -0.69
PTPN20-228ENST00000513266 FAM86B2P0C5J1 330 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 OR1D2P34982 312 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 HELZP42694 1942 aaKnown RBP10.71□□□□□ -0.69
PTPN20-228ENST00000513266 PRKCEQ02156 737 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 FAM171A1Q5VUB5 890 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 NIPA1Q7RTP0 329 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 CEP57Q86XR8 500 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 RHPN2Q8IUC4 686 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 SMAP1Q8IYB5 467 aaPredicted RBP10.71□□□□□ -0.69
PTPN20-228ENST00000513266 CAMKK1Q8N5S9 505 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 TTC8Q8TAM2 541 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 HASPINQ8TF76 798 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 CEP89Q96ST8 783 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 CORO1BQ9BR76 489 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 TRPV4Q9HBA0 871 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 UBN1Q9NPG3 1134 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 DKK4Q9UBT3 224 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 EVLQ9UI08 416 aaPredicted RBP10.71□□□□□ -0.69
PTPN20-228ENST00000513266 HES2Q9Y543 173 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 IPPQ9Y573 584 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 PCDHA10Q9Y5I2 948 aa10.71□□□□□ -0.69
PTPN20-228ENST00000513266 SPTAN1Q13813 2472 aaKnown RBP10.7□□□□□ -0.7
PTPN20-228ENST00000513266 PLXND1Q9Y4D7 1925 aa10.7□□□□□ -0.7
PTPN20-228ENST00000513266 IGLV3-22A0A075B6J6 115 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms