RNA–Protein interactions for RNA: ENST00000513098.5

UBE2D3-231, Transcript of ubiquitin conjugating enzyme E2 D3, human

TSL 3

Gene UBE2D3, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2D3-231	ENST00000513098	SPDYE4	A6NLX3	237 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SLC26A4	O43511	780 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	N4BP1	O75113	896 aa	Known RBP	13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ASGR2	P07307	311 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PROZ	P22891	400 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PEX3	P56589	373 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TCF15	Q12870	199 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MAPK7	Q13164	816 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DMP1	Q13316	513 aa	Predicted RBP	13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TDG	Q13569	410 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TMEM132A	Q24JP5	1023 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RTP2	Q5QGT7	225 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RTL10	Q7L3V2	364 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PALB2	Q86YC2	1186 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SPIRE2	Q8WWL2	714 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RABGGTA	Q92696	567 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	UROC1	Q96N76	676 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CLSTN3	Q9BQT9	956 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PRKD2	Q9BZL6	878 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KCNK12	Q9HB15	430 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KCND2	Q9NZV8	630 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KMT2E	Q8IZD2	1858 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TRIP11	Q15643	1979 aa		13.8	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DOCK8	Q8NF50	2099 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	VPS13A	Q96RL7	3174 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SMIM28	A0A1B0GU29	152 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CASTOR2	A6NHX0	329 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PP2D1	A8MPX8	630 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ABLIM1	O14639	778 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	HIP1R	O75146	1068 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RFPL2	O75678	378 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ZMYND10	O75800	440 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KIF4A	O95239	1232 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	FGFR3	P22607	806 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CDC25A	P30304	524 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	GRM5	P41594	1212 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CLCN5	P51795	746 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	VCP	P55072	806 aa	Known RBP	13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	UPP1	Q16831	310 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	FAM171A1	Q5VUB5	890 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CD300LG	Q6UXG3	332 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TAS1R3	Q7RTX0	852 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KCNK18	Q7Z418	384 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ALYREF	Q86V81	257 aa	Known RBP	13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SYT2	Q8N9I0	419 aa	Predicted RBP	13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SMG7	Q92540	1137 aa	Known RBP	13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RUSC1	Q9BVN2	902 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MRPL4	Q9BYD3	311 aa	Known RBP	13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	GDA	Q9Y2T3	454 aa		13.79	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CCDC169	A6NNP5	214 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CD2BP2	O95400	341 aa	Known RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PDGFB	P01127	241 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	POU2F2	P09086	479 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	HNRNPA1	P09651	372 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SPATA31D3	P0C874	917 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MCF2	P10911	925 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KCNE1	P15382	129 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	LIG1	P18858	919 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	GJB2	P29033	226 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	HOXA9	P31269	272 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MRE11	P49959	708 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	RAB33A	Q14088	237 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	UVSSA	Q2YD98	709 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	MCTP1	Q6DN14	999 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	SPATA31D4	Q6ZUB0	917 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DDX27	Q96GQ7	796 aa	Known RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	AK8	Q96MA6	479 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	PNMA5	Q96PV4	448 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	KMT5A	Q9NQR1	393 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CACNG4	Q9UBN1	327 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	FBXW11	Q9UKB1	542 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	DUSP12	Q9UNI6	340 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	CLUH	O75153	1309 aa		13.78	□□□□□ -0.2
UBE2D3-231	ENST00000513098	TRAPPC3	O43617	180 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	B3GAT3	O94766	335 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PLS3	P13797	630 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	RPL17	P18621	184 aa	Known RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SCP2	P22307	547 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CLCNKB	P51801	687 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SMTN	P53814	917 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	YARS	P54577	528 aa	Known RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC12A3	P55017	1021 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	PSMD5	Q16401	504 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ASTL	Q6HA08	431 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	TMEM161B	Q8NDZ6	487 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CCDC94	Q9BW85	323 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	CDT1	Q9H211	546 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SMOC2	Q9H3U7	446 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	UPF2	Q9HAU5	1272 aa	Known RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	SLC38A7	Q9NVC3	462 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	WNT16	Q9UBV4	365 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	BACE2	Q9Y5Z0	518 aa		13.77	□□□□□ -0.21
UBE2D3-231	ENST00000513098	DOCK6	Q96HP0	2047 aa		13.76	□□□□□ -0.21
UBE2D3-231	ENST00000513098	VWA8	A3KMH1	1905 aa		13.76	□□□□□ -0.21

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