RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 GUCY1A2P33402 732 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 ALDH1A3P47895 512 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 PIN1Q13526 163 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 ANKS6Q68DC2 871 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 NAIF1Q69YI7 327 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 DRICH1Q6PGQ1 229 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 SPATA31D4Q6ZUB0 917 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 TTC7BQ86TV6 843 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 CMTR2Q8IYT2 770 aaKnown RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 RNF169Q8NCN4 708 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 OR2I1PQ8NGU4 316 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 PHACTR3Q96KR7 559 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 DCLRE1CQ96SD1 692 aaKnown RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 NDC1Q9BTX1 674 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 CPEB1Q9BZB8 566 aaKnown RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.99□□□□□ -1.29
CHD1-209ENST00000512844 TCEAL9Q9UHQ7 104 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 XDHP47989 1333 aa6.99□□□□□ -1.29
CHD1-209ENST00000512844 KLRG2A4D1S0 409 aaPredicted RBP6.98□□□□□ -1.29
CHD1-209ENST00000512844 TRIM24O15164 1050 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 SCAF4O95104 1147 aaKnown RBP6.98□□□□□ -1.29
CHD1-209ENST00000512844 PF4V1P10720 104 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 MXRA7P84157 204 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 RAB39AQ14964 217 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 THEMIS2Q5TEJ8 643 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 ZNF529Q6P280 563 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 SYNE4Q8N205 404 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 CPT1CQ8TCG5 803 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 VPS11Q9H270 941 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 ZNF180Q9UJW8 692 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 LIMCH1Q9UPQ0 1083 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 ACTL7AQ9Y615 435 aa6.98□□□□□ -1.29
CHD1-209ENST00000512844 DIRC3C9JPN6 131 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 PPFIA4O75335 1185 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 SLC6A9P48067 706 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 PLEKHG6Q3KR16 790 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 C3orf36Q3SXR2 165 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 RABL3Q5HYI8 236 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 HTR3DQ70Z44 454 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 IL17DQ8TAD2 202 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 SLC35B2Q8TB61 432 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 CLPTM1LQ96KA5 538 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 NUP88Q99567 741 aaPredicted RBP6.97□□□□□ -1.29
CHD1-209ENST00000512844 SIK3Q9Y2K2 1263 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 REXO2Q9Y3B8 237 aaKnown RBP6.97□□□□□ -1.29
CHD1-209ENST00000512844 IPPQ9Y573 584 aa6.97□□□□□ -1.29
CHD1-209ENST00000512844 KIAA0391O15091 583 aaKnown RBP6.96□□□□□ -1.3
CHD1-209ENST00000512844 FAM20BO75063 409 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 AMHP03971 560 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 ZSCAN20P17040 1043 aaPredicted RBP6.96□□□□□ -1.3
CHD1-209ENST00000512844 FPR1P21462 350 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 SMARCA1P28370 1054 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 CTXN1P60606 82 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 NHLH2Q02577 135 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 MCL1Q07820 350 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 FOXE3Q13461 319 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 MTM1Q13496 603 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 IL10RAQ13651 578 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 CCDC157Q569K6 752 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 OTUD7BQ6GQQ9 843 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 USP51Q70EK9 711 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 GPRIN1Q7Z2K8 1008 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 AOPEPQ8N6M6 819 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 NLGN4YQ8NFZ3 816 aaPredicted RBP6.96□□□□□ -1.3
CHD1-209ENST00000512844 KAT5Q92993 513 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 RAB24Q969Q5 203 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 C11orf54Q9H0W9 315 aaPredicted RBP6.96□□□□□ -1.3
CHD1-209ENST00000512844 ZNF703Q9H7S9 590 aaPredicted RBP6.96□□□□□ -1.3
CHD1-209ENST00000512844 TRPM5Q9NZQ8 1165 aa6.96□□□□□ -1.3
CHD1-209ENST00000512844 MTHFD1P11586 935 aaKnown RBP6.95□□□□□ -1.3
CHD1-209ENST00000512844 AKAP5P24588 427 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 PCSK1P29120 753 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 APOBEC3AP31941 199 aaPredicted RBP6.95□□□□□ -1.3
CHD1-209ENST00000512844 TUBA3CQ13748 450 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 LSM12Q3MHD2 195 aaKnown RBP6.95□□□□□ -1.3
CHD1-209ENST00000512844 C1QL3Q5VWW1 255 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 TUBA3EQ6PEY2 450 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 SEM1Q6ZVN7 128 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 JDP2Q8WYK2 163 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 KCNH6Q9H252 994 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 TCF7L1Q9HCS4 588 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 KMT5AQ9NQR1 393 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 SERPINB13Q9UIV8 391 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 POLHQ9Y253 713 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 ATP11BQ9Y2G3 1177 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 ATRNL1Q5VV63 1379 aa6.95□□□□□ -1.3
CHD1-209ENST00000512844 OFD1O75665 1012 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 ZRANB2O95218 330 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD1-209ENST00000512844 ARIH2O95376 493 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 AMY1AP04745 511 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 HLA-DOAP06340 250 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 C1SP09871 688 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 U2AF1L5P0DN76 240 aaPredicted RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 PDCP20941 246 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 PTGS2P35354 604 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 RAB27AP51159 221 aa6.94□□□□□ -1.3
CHD1-209ENST00000512844 U2AF1Q01081 240 aaKnown RBP eCLIP6.94□□□□□ -1.3
CHD1-209ENST00000512844 TOB2Q14106 344 aaPredicted RBP6.94□□□□□ -1.3
CHD1-209ENST00000512844 IFIT1BQ5T764 474 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms