RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 KRT79Q5XKE5 535 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 CWF19L1Q69YN2 538 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 PDXDC1Q6P996 788 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 CEP57Q86XR8 500 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 LNX1Q8TBB1 728 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 NXPE3Q969Y0 559 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 MYADMQ96S97 322 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 CXCL16Q9H2A7 254 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 POLD4Q9HCU8 107 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.18■□□□□ 0.185e-30■■■■■ 28.6
CCHCR1-229ENST00000512418 FBXW11Q9UKB1 542 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 FBXL21Q9UKT6 434 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 DNM3Q9UQ16 869 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 KIF3AQ9Y496 699 aa16.18■□□□□ 0.18
CCHCR1-229ENST00000512418 DOCK8Q8NF50 2099 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 CCDC169A6NNP5 214 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 PRPHP41219 470 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 NPTX2P47972 431 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 DMP1Q13316 513 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 LIN9Q5TKA1 542 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 GET4Q7L5D6 327 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 FLCNQ8NFG4 579 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 PPP1R10Q96QC0 940 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 CLSTN3Q9BQT9 956 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 TNFSF13BQ9Y275 285 aa16.17■□□□□ 0.18
CCHCR1-229ENST00000512418 VWA8A3KMH1 1905 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 E9PMD0 336 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 HIP1RO75146 1068 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 B3GAT3O94766 335 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 AOC1P19801 751 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 HOXA9P31269 272 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 PEX3P56589 373 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 GLRA4Q5JXX5 417 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 DTHD1Q6ZMT9 781 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 DAW1Q8N136 415 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 SIX5Q8N196 739 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 RSAD2Q8WXG1 361 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 DRC1Q96MC2 740 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 UROC1Q96N76 676 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 MRPL4Q9BYD3 311 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 TOPORSQ9NS56 1045 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 ARHGAP28Q9P2N2 729 aa16.16■□□□□ 0.18
CCHCR1-229ENST00000512418 PP2D1A8MPX8 630 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 NARSO43776 548 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 C8AP07357 584 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 HNRNPA1P09651 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 LAMP2P13473 410 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 NPR3P17342 541 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 GRM5P41594 1212 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 CLCNKBP51801 687 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 YARSP54577 528 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 RABEP1Q15276 862 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 ZNF568Q3ZCX4 644 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 PPM1LQ5SGD2 360 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 CEP120Q8N960 986 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 ACO2Q99798 780 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 TIPINQ9BVW5 301 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 CCDC94Q9BW85 323 aaPredicted RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 CDT1Q9H211 546 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 C17orf75Q9HAS0 396 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 KMT5AQ9NQR1 393 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 WNT16Q9UBV4 365 aa16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 RBM19Q9Y4C8 960 aaKnown RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 ZFP37Q9Y6Q3 630 aaPredicted RBP16.15■□□□□ 0.18
CCHCR1-229ENST00000512418 PROB1E7EW31 1015 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 ADAM12O43184 909 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 TRAPPC3O43617 180 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 ST18O60284 1047 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 GFRA3O60609 400 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 CFHP08603 1231 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 SRFP11831 508 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 FGFR3P22607 806 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 FSHRP23945 695 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 CDC25AP30304 524 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 IL17AQ16552 155 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 UPP1Q16831 310 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 RILPL1Q5EBL4 403 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 RINT1Q6NUQ1 792 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 C1orf186Q6ZWK4 172 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 GRASPQ7Z6J2 395 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 SLC44A3Q8N4M1 653 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 RTP3Q9BQQ7 232 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 MMTAG2Q9BU76 263 aaKnown RBP16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 RUSC1Q9BVN2 902 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 PTPRHQ9HD43 1115 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 MTRRQ9UBK8 725 aa16.14■□□□□ 0.17
CCHCR1-229ENST00000512418 TRIP11Q15643 1979 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 SMIM28A0A1B0GU29 152 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 ANHXE9PGG2 379 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 XYLBO75191 536 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 POU2F2P09086 479 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 OR1D2P34982 312 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 ATP2C1P98194 919 aaPredicted RBP16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 MAPK7Q13164 816 aa16.13■□□□□ 0.17
CCHCR1-229ENST00000512418 HTR4Q13639 388 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms