RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RPAP3Q9H6T3 665 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 ZNF335Q9H4Z2 1342 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 ENC1O14682 589 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ATP9BO43861 1147 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 MAN1A2O60476 641 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 CTNND1O60716 968 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 NDUFS3O75489 264 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SERPINI2O75830 405 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ITGA4P13612 1032 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 QARSP47897 775 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 PDAP1Q13442 181 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 ANGPT1Q15389 498 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 COBLL1Q53SF7 1204 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 CATSPER3Q86XQ3 398 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 NEK9Q8TD19 979 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 GEMIN8Q9NWZ8 242 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 ZBTB5O15062 677 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ASAP2O43150 1006 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ZNF189O75820 626 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 CCDC159P0C7I6 412 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 BRAFP15056 766 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 HARS2P49590 506 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 NDUFA8P51970 172 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ALX1Q15699 326 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ALS2CLQ60I27 953 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 RCSD1Q6JBY9 416 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SYT2Q8N9I0 419 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 CYTH2Q99418 400 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 C11orf70Q9BRQ4 267 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 ADA2Q9NZK5 511 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 FAM107AO95990 144 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 P4HBP07237 508 aaKnown RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 GCLMP48507 274 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SNCBQ16143 134 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 SMYD4Q8IYR2 804 aaPredicted RBP6.1□□□□□ -1.43
USP38-203ENST00000511739 SNX31Q8N9S9 440 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 RNF149Q8NC42 400 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 RFWD2Q8NHY2 731 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 RABGGTAQ92696 567 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 MRFAP1L1Q96HT8 127 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 HEMGNQ9BXL5 484 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 HDAC6Q9UBN7 1215 aa6.1□□□□□ -1.43
USP38-203ENST00000511739 CARMIL3Q8ND23 1372 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CCL15-CCL14A0A0B4J2E2 113 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 FAM196BA6NMK8 535 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 LZTS3O60299 673 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SYNCRIPO60506 623 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 ACSL3O95573 720 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 GH1P01241 217 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 SLFN14P0C7P3 912 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MYBP10242 640 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ERVK-10P10266 1014 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 IGFBP4P22692 258 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CDC25AP30304 524 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CDC25BP30305 580 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 GNA15P30679 374 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 RFX3P48380 749 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CCL15Q16663 113 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 DUOXA2Q1HG44 320 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 KIZQ2M2Z5 673 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 GNASQ5JWF2 1037 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ZNF507Q8TCN5 953 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 SLITRK1Q96PX8 696 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 YME1L1Q96TA2 773 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 SENP2Q9HC62 589 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 DNAJC12Q9UKB3 198 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MON2Q7Z3U7 1717 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CYP2D7A0A087X1C5 515 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PRR23D1E9PI22 279 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 PRR23D2P0DMB1 279 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 HPGDP15428 266 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CCNE1P24864 410 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 STAT5BP51692 787 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 EPHB4P54760 987 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PSMC5P62195 406 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 UBE3AQ05086 875 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 LRRC63Q05C16 580 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PTRHD1Q6GMV3 140 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 CYFIP1Q7L576 1253 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MICALL2Q8IY33 904 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 PPM1NQ8N819 430 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 GTF3C2Q8WUA4 911 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 PABPC5Q96DU9 382 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 ZNF512BQ96KM6 892 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 FMO2Q99518 471 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 OXCT2Q9BYC2 517 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 EML4Q9HC35 981 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 SLC38A7Q9NVC3 462 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CNOT7Q9UIV1 285 aaKnown RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 A0A0G2JND7 137 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 H0YC42 278 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MAPK13O15264 365 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 MEFVO15553 781 aaPredicted RBP6.09□□□□□ -1.43
USP38-203ENST00000511739 DCTN3O75935 186 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 VCLP18206 1134 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 CXCR5P32302 372 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 RGS4P49798 205 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 SULT1E1P49888 294 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 EFNA5P52803 228 aa6.09□□□□□ -1.43
USP38-203ENST00000511739 ACTR2P61160 394 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms