RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 CCDC73Q6ZRK6 1079 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 SV2BQ7L1I2 683 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 DYMQ7RTS9 669 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 ADHFE1Q8IWW8 467 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 DDX12PQ92771 950 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 DNAJC19Q96DA6 116 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 MRPL17Q9NRX2 175 aaKnown RBP12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 TBX20Q9UMR3 447 aa12.72□□□□□ -0.37
SH3RF1-205ENST00000511421 SMIM28A0A1B0GU29 152 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 K7ENM7 598 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 KIF4AO95239 1232 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 PIGRP01833 764 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 URODP06132 367 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 EPCAMP16422 314 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 HOXB8P17481 243 aaPredicted RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 IGFBP6P24592 240 aaPredicted RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 NMT1P30419 496 aaKnown RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 YARSP54577 528 aaKnown RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 GTF2BQ00403 316 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 NOLC1Q14978 699 aaKnown RBP eCLIP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 AXDND1Q5T1B0 1012 aaPredicted RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 KHSRPQ92945 711 aaKnown RBP eCLIP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 SNX27Q96L92 541 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 ZMAT2Q96NC0 199 aaKnown RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 ACAP3Q96P50 834 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 ZHX3Q9H4I2 956 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 RXFP1Q9HBX9 757 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 TOPORSQ9NS56 1045 aaPredicted RBP12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 ANKFY1Q9P2R3 1169 aa12.71□□□□□ -0.37
SH3RF1-205ENST00000511421 C2CD2LO14523 706 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 CLDN3O15551 220 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 CUTAO60888 179 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 TADA2AO75478 443 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 HARSP12081 509 aaKnown RBP12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 STAT6P42226 847 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 GLUD2P49448 558 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SOX4Q06945 474 aaPredicted RBP12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 E2F4Q16254 413 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SLC10A6Q3KNW5 377 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 USP41Q3LFD5 358 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SEZ6Q53EL9 994 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 ATL3Q6DD88 541 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SHC4Q6S5L8 630 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 CD300LGQ6UXG3 332 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 PPFIBP1Q86W92 1011 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SFR1Q86XK3 245 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 GPR65Q8IYL9 337 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 PDILTQ8N807 584 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 TMEM87AQ8NBN3 555 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 B3GALT6Q96L58 329 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 ST6GALNAC4Q9H4F1 302 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 CNTN3Q9P232 1028 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SSX2IPQ9Y2D8 614 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 ZDHHC9Q9Y397 364 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 C5orf42Q9H799 3197 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 TEX28O15482 410 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 KCNE1P15382 129 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 KLRC2P26717 231 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 CLCN4P51793 760 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 DNM1Q05193 864 aaKnown RBP12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 ZC2HC1CQ53FD0 456 aaPredicted RBP12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 SLC39A4Q6P5W5 647 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 ZNF720Q7Z2F6 126 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 MAP4K3Q8IVH8 894 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 KCNG4Q8TDN1 519 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 HASPINQ8TF76 798 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 BICD1Q96G01 975 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 APOL5Q9BWW9 433 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 STRA6Q9BX79 667 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 GOLGA2P5Q9HBQ8 144 aa12.7□□□□□ -0.38
SH3RF1-205ENST00000511421 MYH15Q9Y2K3 1946 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 SF3B1O75533 1304 aaKnown RBP eCLIP12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 TRIP11Q15643 1979 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 FRMD3A2A2Y4 597 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 TMEM189-UBE2V1I3L0A0 370 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 HNRNPDLO14979 420 aaKnown RBP12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 FAM189A1O60320 539 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 PPP1R37O75864 691 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 SSTR3P32745 418 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 LIG4P49917 911 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 CLCNKBP51801 687 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 UPP1Q16831 310 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 RTP2Q5QGT7 225 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 KIAA1841Q6NSI8 718 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 DCLRE1AQ6PJP8 1040 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 C12orf76Q8N812 135 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 RIN2Q8WYP3 895 aaPredicted RBP12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 UROC1Q96N76 676 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 ADAM7Q9H2U9 754 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 DZANK1Q9NVP4 752 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 SEL1LQ9UBV2 794 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 CDH22Q9UJ99 828 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 RCOR1Q9UKL0 485 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 PCDHA7Q9UN72 937 aa12.69□□□□□ -0.38
SH3RF1-205ENST00000511421 A0A0B4J269 797 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 ANKRD63C9JTQ0 380 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 CLTAP09496 248 aa12.68□□□□□ -0.38
SH3RF1-205ENST00000511421 GAP43P17677 238 aa12.68□□□□□ -0.38
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