RNA–Protein interactions for RNA: ENST00000511248.1

PRKAA1-208, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, human

TSL 2

Gene PRKAA1, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKAA1-208	ENST00000511248	EPS15L1	Q9UBC2	864 aa		11.21	□□□□□ -0.61
PRKAA1-208	ENST00000511248	NOL7	Q9UMY1	257 aa	Known RBP	11.21	□□□□□ -0.61
PRKAA1-208	ENST00000511248	CACNA1A	O00555	2505 aa		11.21	□□□□□ -0.61
PRKAA1-208	ENST00000511248	C2orf16	Q68DN1	1984 aa		11.21	□□□□□ -0.62
PRKAA1-208	ENST00000511248	KRBA1	A5PL33	1030 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SPTLC2	O15270	562 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LYPLA2	O95372	231 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PAPLN	O95428	1278 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CFH	P08603	1231 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	AKAP5	P24588	427 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GBP2	P32456	591 aa	Predicted RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DEK	P35659	375 aa	Known RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ARL2	P36404	184 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FOSB	P53539	338 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	POU5F1B	Q06416	359 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NR5A1	Q13285	461 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TFDP1	Q14186	410 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SF3A1	Q15459	793 aa	Known RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PHLDB3	Q6NSJ2	640 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ZC3H14	Q6PJT7	736 aa	Known RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LRSAM1	Q6UWE0	723 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PALB2	Q86YC2	1186 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SLC44A3	Q8N4M1	653 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	HDAC7	Q8WUI4	952 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RABGGTA	Q92696	567 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NAP1L4	Q99733	375 aa	Known RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CACNG4	Q9UBN1	327 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ARID2	Q68CP9	1835 aa		11.2	□□□□□ -0.62
PRKAA1-208	ENST00000511248		A0A087WWV3	80 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	BTBD18	B2RXH4	712 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	WNT7A	O00755	349 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TGM5	O43548	720 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NR1I2	O75469	434 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DGAT1	O75907	488 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SRF	P11831	508 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RPL17	P18621	184 aa	Known RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RFX1	P22670	979 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GLRA2	P23416	452 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ME1	P48163	572 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NCBP1	Q09161	790 aa	Known RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PUM1	Q14671	1186 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LILRA6	Q6PI73	481 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CCDC73	Q6ZRK6	1079 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CDR2L	Q86X02	465 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RIN2	Q8WYP3	895 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	COLEC11	Q9BWP8	271 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NFKBIZ	Q9BYH8	718 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TRIM6	Q9C030	488 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NT5C3A	Q9H0P0	336 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ANKEF1	Q9NU02	776 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	9e-7	■■□□□ 12.7
PRKAA1-208	ENST00000511248	KLK14	Q9P0G3	267 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ADAM28	Q9UKQ2	775 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GIT1	Q9Y2X7	761 aa		11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	EP300	Q09472	2414 aa	Predicted RBP	11.19	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FAM237A	A0A1B0GTK4	181 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248		A0A1B0GUA9	196 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ANHX	E9PGG2	379 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CUTA	O60888	179 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NPTXR	O95502	500 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	LAMP2	P13473	410 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CMA1	P23946	247 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RARRES1	P49788	294 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FAM160A1	Q05DH4	1040 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ORC2	Q13416	577 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	HTR4	Q13639	388 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PTPA	Q15257	358 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CALCRL	Q16602	461 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	USP41	Q3LFD5	358 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FUT10	Q6P4F1	479 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SLC27A1	Q6PCB7	646 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RBM43	Q6ZSC3	357 aa	Known RBP	11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DGLUCY	Q7Z3D6	616 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GLYCTK	Q8IVS8	523 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GPR65	Q8IYL9	337 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	HACE1	Q8IYU2	909 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PIGO	Q8TEQ8	1089 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RMDN1	Q96DB5	314 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PAAF1	Q9BRP4	392 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PRKD2	Q9BZL6	878 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	NUP62CL	Q9H1M0	184 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PLEKHA4	Q9H4M7	779 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TTC12	Q9H892	705 aa	Predicted RBP	11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TBC1D17	Q9HA65	648 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GPRC5C	Q9NQ84	441 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	FNIP2	Q9P278	1114 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CA14	Q9ULX7	337 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	PCDHA12	Q9UN75	941 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	SIT1	Q9Y3P8	196 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	DNAH14	Q0VDD8	3507 aa		11.18	□□□□□ -0.62
PRKAA1-208	ENST00000511248	ZMYM2	Q9UBW7	1377 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	TTLL13P	A6NNM8	815 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CAVIN2	O95810	425 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	CD44	P16070	742 aa	Known RBP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	GRIK3	Q13003	919 aa		11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	HSP90AA2P	Q14568	343 aa	Predicted RBP	11.17	□□□□□ -0.62
PRKAA1-208	ENST00000511248	RTP2	Q5QGT7	225 aa		11.17	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms