RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 PTPRZ1P23471 2315 aaPredicted RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 LTBP2Q14767 1821 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 KIF20BQ96Q89 1820 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 ACACBO00763 2458 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 TRIOO75962 3097 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 PTPN1P18031 435 aaKnown RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 NAT1P18440 290 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 GPTP24298 496 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 GLRBP48167 497 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 JAM2P57087 298 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 GPSM2P81274 684 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 DBPQ10586 325 aaPredicted RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 NFATC3Q12968 1075 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 SF3A1Q15459 793 aaKnown RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 SLC10A5Q5PT55 438 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 BTBD8Q5XKL5 378 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 ANKRD13AQ8IZ07 590 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 NLGN4XQ8N0W4 816 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 STPG3Q8N7X2 389 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 GSTCDQ8NEC7 633 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 MXD3Q9BW11 206 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 ARHGAP20Q9P2F6 1191 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 ADAM29Q9UKF5 820 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 OGDHLQ9ULD0 1010 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 LRRC37AA6NMS7 1700 aa7.06□□□□□ -1.28
GYPB-212ENST00000511198 ROCK2O75116 1388 aaKnown RBP7.06□□□□□ -1.28
GYPB-212ENST00000511198 GPR179Q6PRD1 2367 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 ZNF561-AS1K7EIQ3 104 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 KCNQ3O43525 872 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 U2AF1L5P0DN76 240 aaPredicted RBP7.05□□□□□ -1.28
GYPB-212ENST00000511198 U2AF1Q01081 240 aaKnown RBP eCLIP7.05□□□□□ -1.28
GYPB-212ENST00000511198 ACAP1Q15027 740 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 TRIM61Q5EBN2 209 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 PTRH1Q86Y79 214 aaKnown RBP7.05□□□□□ -1.28
GYPB-212ENST00000511198 APOBEC3FQ8IUX4 373 aaKnown RBP7.05□□□□□ -1.28
GYPB-212ENST00000511198 KBTBD2Q8IY47 623 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 PRSS33Q8NF86 280 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 SLC7A14Q8TBB6 771 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 IGDCC4Q8TDY8 1250 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 BARX1Q9HBU1 254 aaPredicted RBP7.05□□□□□ -1.28
GYPB-212ENST00000511198 SMURF1Q9HCE7 757 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 PPP4R1LQ9P1A2 415 aa7.05□□□□□ -1.28
GYPB-212ENST00000511198 FLNBO75369 2602 aaKnown RBP7.05□□□□□ -1.28
GYPB-212ENST00000511198 MGAMO43451 1857 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 OTOFQ9HC10 1997 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 PSME4Q14997 1843 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 CCDC66A2RUB6 948 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 LAMTOR5O43504 91 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 WDHD1O75717 1129 aaPredicted RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 FBXO21O94952 628 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ID4P47928 161 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 GRAPQ13588 217 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 SURF1Q15526 300 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 AAK1Q2M2I8 961 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 FIGNQ5HY92 759 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 SULT6B1Q6IMI4 303 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 Q6ZUG5 572 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 LIMS2Q7Z4I7 341 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 PLEKHH3Q7Z736 793 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 GGNQ86UU5 652 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ZC3H7AQ8IWR0 971 aaKnown RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 TBC1D16Q8TBP0 767 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 GRAPLQ8TC17 118 aaPredicted RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 SCLYQ96I15 445 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ZBED3Q96IU2 234 aaPredicted RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 SAMD11Q96NU1 681 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ZCCHC17Q9NP64 241 aaKnown RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 SLC39A2Q9NP94 309 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 RIC8BQ9NVN3 520 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 NDOR1Q9UHB4 597 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ZDHHC9Q9Y397 364 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ATP23Q9Y6H3 246 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 IBTKQ9P2D0 1353 aaPredicted RBP7.04□□□□□ -1.28
GYPB-212ENST00000511198 USP24Q9UPU5 2620 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 LRRC37A2A6NM11 1700 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 NUP98P52948 1817 aa7.04□□□□□ -1.28
GYPB-212ENST00000511198 ZNF536O15090 1300 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 ERC2O15083 957 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 B4GALT4O60513 344 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 EFCAB14O75071 495 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 KRT15P19012 456 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 EPHB4P54760 987 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 PPP2CBP62714 309 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 PPP2CAP67775 309 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 CRY1Q16526 586 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 ZNF34Q8IZ26 560 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 LILRB2Q8N423 598 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 THAP3Q8WTV1 239 aaPredicted RBP7.03□□□□□ -1.28
GYPB-212ENST00000511198 BADQ92934 168 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 TIFAQ96CG3 184 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 AJUBAQ96IF1 538 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 TACO1Q9BSH4 297 aaKnown RBP7.03□□□□□ -1.28
GYPB-212ENST00000511198 SMPD4Q9NXE4 827 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 MYO9BQ13459 2157 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 COL4A1P02462 1669 aa7.03□□□□□ -1.28
GYPB-212ENST00000511198 KCNK3O14649 394 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms