RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 CCDC62Q6P9F0 684 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 XKR5Q6UX68 686 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 ZSCAN30Q86W11 494 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 TTC30AQ86WT1 665 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 SPATA2LQ8IUW3 424 aaPredicted RBP3.1□□□□□ -1.91
CLOCK-209ENST00000511124 C4orf19Q8IY42 314 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 RGL4Q8IZJ4 473 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 NDUFAF2Q8N183 169 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 SPPL3Q8TCT6 385 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 CLP1Q92989 425 aaKnown RBP3.1□□□□□ -1.91
CLOCK-209ENST00000511124 OTUB2Q96DC9 234 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 OSMRQ99650 979 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 LLPHQ9BRT6 129 aaKnown RBP3.1□□□□□ -1.91
CLOCK-209ENST00000511124 DNAJC18Q9H819 358 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 HESX1Q9UBX0 185 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 LRWD1Q9UFC0 647 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 LIMD1Q9UGP4 676 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHB5Q9Y5E4 795 aa3.1□□□□□ -1.91
CLOCK-209ENST00000511124 CCDC163A0A0D9SF12 145 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CLDN3O15551 220 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CCNT1O60563 726 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 B3GAT3O94766 335 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 APBB3O95704 486 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SNHG28P0DPA3 235 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 MCF2P10911 925 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 IFNAR1P17181 557 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 AOC1P19801 751 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 VARSP26640 1264 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 GUCY1A2P33402 732 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 LHX1P48742 406 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 MLLT6P55198 1093 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SNRPFP62306 86 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TPM4P67936 248 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 NUCB1Q02818 461 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CENPCQ03188 943 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 EMC2Q15006 297 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 PFKFB3Q16875 520 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TPD52L1Q16890 204 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 WDR44Q5JSH3 913 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TDRD10Q5VZ19 366 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SGMS1Q86VZ5 419 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CEP57L1Q8IYX8 460 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SIX5Q8N196 739 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CMTR1Q8N1G2 835 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TMEM86AQ8N2M4 240 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 GALNT15Q8N3T1 639 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 KIAA1958Q8N8K9 716 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 IGSF21Q96ID5 467 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 FERMT1Q9BQL6 677 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 C17orf80Q9BSJ5 609 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 MED10Q9BTT4 135 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 ADAMTS10Q9H324 1103 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 AGO4Q9HCK5 861 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TYW1Q9NV66 732 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 NCKIPSDQ9NZQ3 722 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 ADAM28Q9UKQ2 775 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 YBX2Q9Y2T7 364 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 PCDHB2Q9Y5E7 798 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 FAM170BA6NMN3 283 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 M0QYT0 321 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SH2B2O14492 632 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 AP5Z1O43299 807 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 OPHN1O60890 802 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TACC1O75410 805 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 DGKIO75912 1065 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 C8AP07357 584 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 FGRP09769 529 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 XPAP23025 273 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 NAMPTP43490 491 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 RPIAP49247 311 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 C21orf59P57076 290 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 LPIN1Q14693 890 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TMEM132DQ14C87 1099 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 BMP2KLQ5H9B9 411 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CREB3L3Q68CJ9 461 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 KANK3Q6NY19 840 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 FUT10Q6P4F1 479 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 LONP2Q86WA8 852 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SMC5Q8IY18 1101 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SLC39A11Q8N1S5 342 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SPEM1Q8N4L4 309 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 HELQQ8TDG4 1101 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 RNF139Q8WU17 664 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 SCG3Q8WXD2 468 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 C1QTNF7Q9BXJ2 289 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TM6SF1Q9BZW5 370 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TTYH1Q9H313 450 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 STN1Q9H668 368 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 MAGEF1Q9HAY2 307 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 ERVK-5Q9HDB9 667 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 MAN1C1Q9NR34 630 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 WDR70Q9NW82 654 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 TLR7Q9NYK1 1049 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 CHMP5Q9NZZ3 219 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 AFF4Q9UHB7 1163 aaKnown RBP3.09□□□□□ -1.91
CLOCK-209ENST00000511124 DUSP12Q9UNI6 340 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 PSME4Q14997 1843 aa3.09□□□□□ -1.91
CLOCK-209ENST00000511124 DLG5Q8TDM6 1919 aa3.09□□□□□ -1.92
CLOCK-209ENST00000511124 ECM29Q5VYK3 1845 aa3.09□□□□□ -1.92
CLOCK-209ENST00000511124 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms