RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, human

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHFR-208	ENST00000511001	TADA2A	O75478	443 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	BRD1	O95696	1058 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	ADH1A	P07327	375 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	PDC	P20941	246 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	LONP1	P36776	959 aa	Known RBP	13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	UBA7	P41226	1012 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	ZXDA	P98168	799 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	NHLH1	Q02575	133 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	KARS	Q15046	597 aa	Known RBP	13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	USP41	Q3LFD5	358 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	ZNF568	Q3ZCX4	644 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	GLRA4	Q5JXX5	417 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	RTP2	Q5QGT7	225 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	FAM173B	Q6P4H8	233 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	ALKAL1	Q6UXT8	129 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	USP49	Q70CQ1	688 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	HASPIN	Q8TF76	798 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	KCNN1	Q92952	543 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	RIPOR3	Q96MK2	946 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	CCSER1	Q9C0I3	900 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	MAN1C1	Q9NR34	630 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	FNIP2	Q9P278	1114 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	KMT2E	Q8IZD2	1858 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	NOTCH4	Q99466	2003 aa		13.22	□□□□□ -0.29
CHFR-208	ENST00000511001	SF3B1	O75533	1304 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	PAPLN	O95428	1278 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	MAPT	P10636	758 aa	Known RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	MCF2	P10911	925 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	RPL17	P18621	184 aa	Known RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	PLCG1	P19174	1290 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	NCKAP1L	P55160	1127 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	SOX4	Q06945	474 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	MCM6	Q14566	821 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	ATAT1	Q5SQI0	421 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	LILRA6	Q6PI73	481 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	PRSS55	Q6UWB4	352 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	MPZL3	Q6UWV2	235 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	HFE2	Q6ZVN8	426 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	ZBTB33	Q86T24	672 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	GPBP1	Q86WP2	473 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	CMAS	Q8NFW8	434 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	RIN2	Q8WYP3	895 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	CALML4	Q96GE6	196 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	ZMAT2	Q96NC0	199 aa	Known RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	REEP2	Q9BRK0	252 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	HAPLN2	Q9GZV7	340 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	GOLGA2P5	Q9HBQ8	144 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	FOXD4L1	Q9NU39	408 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	FBXO2	Q9UK22	296 aa	Predicted RBP	13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	MTMR6	Q9Y217	621 aa		13.21	□□□□□ -0.29
CHFR-208	ENST00000511001	SMIM28	A0A1B0GU29	152 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	TMEM189-UBE2V1	I3L0A0	370 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001		K7ELQ4	463 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	GLUD1	P00367	558 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	C1R	P00736	705 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	MYB	P10242	640 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	MARCKS	P29966	332 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	CLCNKB	P51801	687 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	ZNF131	P52739	623 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	OSTN	P61366	133 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	DHX8	Q14562	1220 aa	Known RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	PTPN21	Q16825	1174 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	SPECC1	Q5M775	1068 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	FAM171A1	Q5VUB5	890 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	C15orf39	Q6ZRI6	1047 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	PALB2	Q86YC2	1186 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	GLYCTK	Q8IVS8	523 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	C3orf58	Q8NDZ4	430 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	LNX1	Q8TBB1	728 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	PIK3R5	Q8WYR1	880 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	RAD54L	Q92698	747 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	EPSTI1	Q96J88	318 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	SNX27	Q96L92	541 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	FIZ1	Q96SL8	496 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	CLSTN3	Q9BQT9	956 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	CCDC94	Q9BW85	323 aa	Predicted RBP	13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	ODF2L	Q9ULJ1	636 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	NR2E1	Q9Y466	385 aa		13.2	□□□□□ -0.3
CHFR-208	ENST00000511001	ZDBF2	Q9HCK1	2354 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	ADAM12	O43184	909 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	TGM5	O43548	720 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	TOM1L1	O75674	476 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	RFPL2	O75678	378 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	SPATA31D3	P0C874	917 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	HARS	P12081	509 aa	Known RBP	13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	KCNE1	P15382	129 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	SMTN	P53814	917 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	UPP1	Q16831	310 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	SEZ6	Q53EL9	994 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	ZPBP2	Q6X784	338 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	TRIM67	Q6ZTA4	783 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	SPATA31D4	Q6ZUB0	917 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	BMP8A	Q7Z5Y6	402 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	ZDHHC14	Q8IZN3	488 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	HDAC7	Q8WUI4	952 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	ZNF707	Q96C28	371 aa	Predicted RBP	13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	CLIC6	Q96NY7	704 aa		13.19	□□□□□ -0.3
CHFR-208	ENST00000511001	ACAP3	Q96P50	834 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 144 ms