RNA–Protein interactions for RNA: ENST00000509962.5

SMAD5-206, Transcript of SMAD family member 5, humanhuman

TSL 4

Gene SMAD5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-206ENST00000509962 POTEGQ6S5H5 508 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 ST13P5Q8NFI4 369 aaPredicted RBP16.36■□□□□ 0.21
SMAD5-206ENST00000509962 BSNDQ8WZ55 320 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 SHDQ96IW2 340 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 SEMA4AQ9H3S1 761 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 SLC2A4RGQ9NR83 387 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 USP20Q9Y2K6 914 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 GDAQ9Y2T3 454 aa16.36■□□□□ 0.21
SMAD5-206ENST00000509962 DOCK8Q8NF50 2099 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 C8AP07357 584 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 OR52Z1P0C646 297 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 MUTP22033 750 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 OR1D2P34982 312 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 EFNA5P52803 228 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 ORC2Q13416 577 aaPredicted RBP16.35■□□□□ 0.21
SMAD5-206ENST00000509962 UVSSAQ2YD98 709 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 AXDND1Q5T1B0 1012 aaPredicted RBP16.35■□□□□ 0.21
SMAD5-206ENST00000509962 APBB1IPQ7Z5R6 666 aaPredicted RBP16.35■□□□□ 0.21
SMAD5-206ENST00000509962 C8orf76Q96K31 380 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 CCDC113Q9H0I3 377 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 CXCL16Q9H2A7 254 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 POLD4Q9HCU8 107 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 ARHGEF3Q9NR81 526 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 CDH7Q9ULB5 785 aa16.35■□□□□ 0.21
SMAD5-206ENST00000509962 RIF1Q5UIP0 2472 aaKnown RBP16.35■□□□□ 0.21
SMAD5-206ENST00000509962 K7ERI5 159 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 CCL16O15467 120 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 TRAPPC3O43617 180 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 B3GAT3O94766 335 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 DCNP07585 359 aaKnown RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 HOXA9P31269 272 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 CCT6AP40227 531 aaKnown RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 RBM25P49756 843 aaKnown RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 GPC5P78333 572 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 NTHL1P78549 312 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 RAB33AQ14088 237 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 NAB2Q15742 525 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 DCAF4L1Q3SXM0 396 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 EEF1DP3Q658K8 133 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 HAUS3Q68CZ6 603 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 PARM1Q6UWI2 310 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 KIFAP3Q92845 792 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 FGF14Q92915 247 aa16.34■□□□□ 0.21
SMAD5-206ENST00000509962 RPP25Q9BUL9 199 aaKnown RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 FOXP1Q9H334 677 aaPredicted RBP16.34■□□□□ 0.21
SMAD5-206ENST00000509962 ADAM12O43184 909 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 LMNAP02545 664 aaKnown RBP16.33■□□□□ 0.2
SMAD5-206ENST00000509962 FGFR3P22607 806 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 ATF7IP2Q5U623 682 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 MTSS1LQ765P7 747 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 RTL10Q7L3V2 364 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 SLC7A14Q8TBB6 771 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 FGF13Q92913 245 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 UROC1Q96N76 676 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 BHMT2Q9H2M3 363 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 LRWD1Q9UFC0 647 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 LIMCH1Q9UPQ0 1083 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 DOCK6Q96HP0 2047 aa16.33■□□□□ 0.2
SMAD5-206ENST00000509962 FAM186AA6NE01 2351 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 CLCNKBP51801 687 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 YARSP54577 528 aaKnown RBP16.32■□□□□ 0.2
SMAD5-206ENST00000509962 STARD6P59095 220 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 SNW1Q13573 536 aaKnown RBP16.32■□□□□ 0.2
SMAD5-206ENST00000509962 TTC38Q5R3I4 469 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 NT5DC1Q5TFE4 455 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 C1orf210Q8IVY1 113 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 PPP1R10Q96QC0 940 aaKnown RBP16.32■□□□□ 0.2
SMAD5-206ENST00000509962 KIFC3Q9BVG8 833 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 MTRRQ9UBK8 725 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 KIAA1024Q9UPX6 916 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 STK24Q9Y6E0 443 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 CDY1Q9Y6F8 540 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 R4GN57 208 aa16.32■□□□□ 0.2
SMAD5-206ENST00000509962 CFAP54Q96N23 3096 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 CCDC169A6NNP5 214 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 TMEM189-UBE2V1I3L0A0 370 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 EDN1P05305 212 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 ID4P47928 161 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 PDIA5Q14554 519 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 ECM1Q16610 540 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 UPP1Q16831 310 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 SLC44A4Q53GD3 710 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 GLRA4Q5JXX5 417 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 ZC3H14Q6PJT7 736 aaKnown RBP16.31■□□□□ 0.2
SMAD5-206ENST00000509962 ANKS3Q6ZW76 656 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 CCDC83Q8IWF9 413 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 PJA1Q8NG27 643 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 ITFG1Q8TB96 612 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
SMAD5-206ENST00000509962 DLGAP2Q9P1A6 1054 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 DNMT3BQ9UBC3 853 aaKnown RBP16.31■□□□□ 0.2
SMAD5-206ENST00000509962 NOL7Q9UMY1 257 aaKnown RBP16.31■□□□□ 0.2
SMAD5-206ENST00000509962 TNFSF13BQ9Y275 285 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 SPTBN4Q9H254 2564 aa16.31■□□□□ 0.2
SMAD5-206ENST00000509962 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 KANSL1LA0AUZ9 987 aa16.3■□□□□ 0.2
SMAD5-206ENST00000509962 POU2F2P09086 479 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms