RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 CACNB1Q02641 598 aaPredicted RBP23.28■■□□□ 1.32
LIN54-208ENST00000509748 ZNF568Q3ZCX4 644 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 GLRA4Q5JXX5 417 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 LILRA6Q6PI73 481 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 TRIM67Q6ZTA4 783 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 HFE2Q6ZVN8 426 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 APBB1IPQ7Z5R6 666 aaPredicted RBP23.28■■□□□ 1.32
LIN54-208ENST00000509748 CMASQ8NFW8 434 aaPredicted RBP23.28■■□□□ 1.32
LIN54-208ENST00000509748 MAN1C1Q9NR34 630 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 NR2E1Q9Y466 385 aa23.28■■□□□ 1.32
LIN54-208ENST00000509748 SF3B1O75533 1304 aaKnown RBP eCLIP23.28■■□□□ 1.324e-6■■■■■ 100.3
LIN54-208ENST00000509748 SMIM28A0A1B0GU29 152 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 GLUD1P00367 558 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 MCF2P10911 925 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 RPL17P18621 184 aaKnown RBP23.27■■□□□ 1.32
LIN54-208ENST00000509748 KARSQ15046 597 aaKnown RBP23.27■■□□□ 1.32
LIN54-208ENST00000509748 PTPN21Q16825 1174 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 FAM173BQ6P4H8 233 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 PRSS55Q6UWB4 352 aaPredicted RBP23.27■■□□□ 1.32
LIN54-208ENST00000509748 ZBTB33Q86T24 672 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 KCNN1Q92952 543 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 CALML4Q96GE6 196 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 TSHZ2Q9NRE2 1034 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.27■■□□□ 1.32
LIN54-208ENST00000509748 KCNG1Q9UIX4 513 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 ARIH1Q9Y4X5 557 aaPredicted RBP23.27■■□□□ 1.32
LIN54-208ENST00000509748 ZDBF2Q9HCK1 2354 aa23.27■■□□□ 1.32
LIN54-208ENST00000509748 CITO14578 2027 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 SPATA31D3P0C874 917 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 PLCG1P19174 1290 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 OSTNP61366 133 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 SOX4Q06945 474 aaPredicted RBP23.26■■□□□ 1.31
LIN54-208ENST00000509748 FAM171A1Q5VUB5 890 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 MPZL3Q6UWV2 235 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 C15orf39Q6ZRI6 1047 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 SPATA31D4Q6ZUB0 917 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 USP49Q70CQ1 688 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 GPBP1Q86WP2 473 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 PALB2Q86YC2 1186 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 LNX1Q8TBB1 728 aaPredicted RBP23.26■■□□□ 1.31
LIN54-208ENST00000509748 HDAC7Q8WUI4 952 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 ZMAT2Q96NC0 199 aaKnown RBP23.26■■□□□ 1.31
LIN54-208ENST00000509748 REEP2Q9BRK0 252 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 TTPALQ9BTX7 342 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 CCDC94Q9BW85 323 aaPredicted RBP23.26■■□□□ 1.31
LIN54-208ENST00000509748 CCSER1Q9C0I3 900 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 USTQ9Y2C2 406 aa23.26■■□□□ 1.31
LIN54-208ENST00000509748 TMEM189-UBE2V1I3L0A0 370 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 TGM5O43548 720 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 MYBP10242 640 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 CLCNKBP51801 687 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 ZNF131P52739 623 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 SMTNP53814 917 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 NCKAP1LP55160 1127 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 MCM6Q14566 821 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 UPP1Q16831 310 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 DCLRE1AQ6PJP8 1040 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 BMP8AQ7Z5Y6 402 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 ZDHHC14Q8IZN3 488 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 PIK3R5Q8WYR1 880 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 RAD54LQ92698 747 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 SNX27Q96L92 541 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 CLSTN3Q9BQT9 956 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 RHOBTB2Q9BYZ6 727 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 HAPLN2Q9GZV7 340 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 GOLGA2P5Q9HBQ8 144 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 FBXO2Q9UK22 296 aaPredicted RBP23.25■■□□□ 1.31
LIN54-208ENST00000509748 ODF2LQ9ULJ1 636 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 MTMR6Q9Y217 621 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 HCN4Q9Y3Q4 1203 aa23.25■■□□□ 1.31
LIN54-208ENST00000509748 TMEM221A6NGB7 291 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 M0R296 226 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 TOM1L1O75674 476 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 RFPL2O75678 378 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 KCNE1P15382 129 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 DHX8Q14562 1220 aaKnown RBP23.24■■□□□ 1.31
LIN54-208ENST00000509748 ZPBP2Q6X784 338 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 GLYCTKQ8IVS8 523 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 C3orf58Q8NDZ4 430 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 ZNF707Q96C28 371 aaPredicted RBP23.24■■□□□ 1.31
LIN54-208ENST00000509748 EPSTI1Q96J88 318 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 ACAP3Q96P50 834 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 TCHPQ9BT92 498 aa23.24■■□□□ 1.31
LIN54-208ENST00000509748 LARSQ9P2J5 1176 aaKnown RBP23.24■■□□□ 1.31
LIN54-208ENST00000509748 DOCK6Q96HP0 2047 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 CCDC195A0A1B0GUA6 201 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 K7ELQ4 463 aaPredicted RBP23.23■■□□□ 1.31
LIN54-208ENST00000509748 FGFR3P22607 806 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 MARCKSP29966 332 aaPredicted RBP23.23■■□□□ 1.31
LIN54-208ENST00000509748 YARSP54577 528 aaKnown RBP23.23■■□□□ 1.31
LIN54-208ENST00000509748 ELAVL2Q12926 359 aaKnown RBP23.23■■□□□ 1.31
LIN54-208ENST00000509748 STRN3Q13033 797 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 SPECC1Q5M775 1068 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 HAUS6Q7Z4H7 955 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 ASIC4Q96FT7 647 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 FIZ1Q96SL8 496 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 PLEKHA4Q9H4M7 779 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 TOPORSQ9NS56 1045 aaPredicted RBP23.23■■□□□ 1.31
LIN54-208ENST00000509748 FOXD4L1Q9NU39 408 aa23.23■■□□□ 1.31
LIN54-208ENST00000509748 CNTN3Q9P232 1028 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms