RNA–Protein interactions for RNA: ENST00000509297.5

SMAD5-205, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 854 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-205ENST00000509297 PSMD5Q16401 504 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 ATF7IP2Q5U623 682 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 CWF19L1Q69YN2 538 aaKnown RBP16.96■□□□□ 0.31
SMAD5-205ENST00000509297 PRSS55Q6UWB4 352 aaPredicted RBP16.96■□□□□ 0.31
SMAD5-205ENST00000509297 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.96■□□□□ 0.31
SMAD5-205ENST00000509297 RTL10Q7L3V2 364 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 KCTD17Q8N5Z5 321 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 UROC1Q96N76 676 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 PPP1R10Q96QC0 940 aaKnown RBP16.96■□□□□ 0.31
SMAD5-205ENST00000509297 MYADMQ96S97 322 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 RTP3Q9BQQ7 232 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 DDX19AQ9NUU7 478 aaKnown RBP16.96■□□□□ 0.31
SMAD5-205ENST00000509297 CACNG4Q9UBN1 327 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 DNM3Q9UQ16 869 aa16.96■□□□□ 0.31
SMAD5-205ENST00000509297 ANHXE9PGG2 379 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 H0Y858 1186 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 K7ERI5 159 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 LAMP2P13473 410 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 FGFR3P22607 806 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 NBL1P41271 181 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 XKR4Q5GH76 650 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 DCLRE1AQ6PJP8 1040 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 SLC44A3Q8N4M1 653 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 SNX29Q8TEQ0 813 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 KIFC3Q9BVG8 833 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 CXCL16Q9H2A7 254 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 TMEM134Q9H6X4 195 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 C17orf75Q9HAS0 396 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 PTPRHQ9HD43 1115 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 FAM86C1Q9NVL1 165 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 FBXL21Q9UKT6 434 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 USP20Q9Y2K6 914 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 RBM19Q9Y4C8 960 aaKnown RBP16.95■□□□□ 0.3
SMAD5-205ENST00000509297 VPS13AQ96RL7 3174 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 CFAP54Q96N23 3096 aa16.95■□□□□ 0.3
SMAD5-205ENST00000509297 DMDP11532 3685 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 GFRA3O60609 400 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 SRFP11831 508 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 GRM5P41594 1212 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 NPTX2P47972 431 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 RAB33AQ14088 237 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 NBR1Q14596 966 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 UVSSAQ2YD98 709 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 LIN9Q5TKA1 542 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 KRT79Q5XKE5 535 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 GLYCTKQ8IVS8 523 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 DAW1Q8N136 415 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 SIX5Q8N196 739 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 HASPINQ8TF76 798 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 DRC1Q96MC2 740 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 TIPINQ9BVW5 301 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 TOPORSQ9NS56 1045 aaPredicted RBP16.94■□□□□ 0.3
SMAD5-205ENST00000509297 ARHGAP28Q9P2N2 729 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 KCNG1Q9UIX4 513 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 GDAQ9Y2T3 454 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 PCDHB6Q9Y5E3 794 aa16.94■□□□□ 0.3
SMAD5-205ENST00000509297 WDR87Q6ZQQ6 2873 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 TRAPPC3O43617 180 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 MYBP10242 640 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 LIG1P18858 919 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 DMP1Q13316 513 aaPredicted RBP16.93■□□□□ 0.3
SMAD5-205ENST00000509297 HTR4Q13639 388 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 UPP1Q16831 310 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 ALKAL1Q6UXT8 129 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 DTHD1Q6ZMT9 781 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 CEP57Q86XR8 500 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 CCDC105Q8IYK2 499 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 FLCNQ8NFG4 579 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 RSAD2Q8WXG1 361 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 ACO2Q99798 780 aaKnown RBP16.93■□□□□ 0.3
SMAD5-205ENST00000509297 NTPCRQ9BSD7 190 aaKnown RBP16.93■□□□□ 0.3
SMAD5-205ENST00000509297 MRPL4Q9BYD3 311 aaKnown RBP16.93■□□□□ 0.3
SMAD5-205ENST00000509297 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.93■□□□□ 0.3
SMAD5-205ENST00000509297 MTRRQ9UBK8 725 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 BACE2Q9Y5Z0 518 aa16.93■□□□□ 0.3
SMAD5-205ENST00000509297 DOCK8Q8NF50 2099 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 SMIM28A0A1B0GU29 152 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 NARSO43776 548 aaKnown RBP16.92■□□□□ 0.3
SMAD5-205ENST00000509297 XYLBO75191 536 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 B3GAT3O94766 335 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 C8AP07357 584 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 PROZP22891 400 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 FSHRP23945 695 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 PEX3P56589 373 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 MAPK7Q13164 816 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 IL17AQ16552 155 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 C8orf34Q49A92 452 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 RILPL1Q5EBL4 403 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 PPM1LQ5SGD2 360 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 RINT1Q6NUQ1 792 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 CD300LGQ6UXG3 332 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 C1orf186Q6ZWK4 172 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 DDX27Q96GQ7 796 aaKnown RBP16.92■□□□□ 0.3
SMAD5-205ENST00000509297 CCDC94Q9BW85 323 aaPredicted RBP16.92■□□□□ 0.3
SMAD5-205ENST00000509297 CDT1Q9H211 546 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 POLD4Q9HCU8 107 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 SLC2A4RGQ9NR83 387 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 SLC38A7Q9NVC3 462 aa16.92■□□□□ 0.3
SMAD5-205ENST00000509297 CCDC169A6NNP5 214 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms