RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 CCDC163A0A0D9SF12 145 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 ERVV-2B6SEH9 535 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 ERN1O75460 977 aaKnown RBP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 VAV2P52735 878 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 CLRN1P58418 232 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 MEF2AQ02078 507 aaPredicted RBP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 ESRP1Q6NXG1 681 aaKnown RBP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 DLK2Q6UY11 383 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 GAB3Q8WWW8 586 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 FUBP3Q96I24 572 aaKnown RBP eCLIP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 PHACTR3Q96KR7 559 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 FDXACB1Q9BRP7 624 aaPredicted RBP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 UNKLQ9H9P5 680 aaKnown RBP3.35□□□□□ -1.87
XRCC4-204ENST00000509268 CABP5Q9NP86 173 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 SPO11Q9Y5K1 396 aa3.35□□□□□ -1.87
XRCC4-204ENST00000509268 KAT6AQ92794 2004 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 ST20-MTHFSA0A0A6YYL1 179 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 LINC01548A6NM66 108 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 ERCC5P28715 1186 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-204ENST00000509268 FLT3LGP49771 235 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 RASA3Q14644 834 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 CYP2A13Q16696 494 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 NACC2Q96BF6 587 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 ELF4Q99607 663 aaPredicted RBP3.34□□□□□ -1.87
XRCC4-204ENST00000509268 ANLNQ9NQW6 1124 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 MTMR4Q9NYA4 1195 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 SAMD15Q9P1V8 674 aa3.34□□□□□ -1.87
XRCC4-204ENST00000509268 MPPED1O15442 326 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 ITGA10O75578 1167 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 SNRPA1P09661 255 aaKnown RBP3.34□□□□□ -1.88
XRCC4-204ENST00000509268 SLC9A1P19634 815 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 GRIA3P42263 894 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 MGAT5Q09328 741 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 NBPF8Q3BBV2 869 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 FAM47AQ5JRC9 791 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 ZCCHC8Q6NZY4 707 aaKnown RBP3.34□□□□□ -1.88
XRCC4-204ENST00000509268 FOXR2Q6PJQ5 311 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 ESPNLQ6ZVH7 1005 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 MED25Q71SY5 747 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 FGD2Q7Z6J4 655 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 GLB1L2Q8IW92 636 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 RTF1Q92541 710 aaKnown RBP3.34□□□□□ -1.88
XRCC4-204ENST00000509268 CEP95Q96GE4 821 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 USP18Q9UMW8 372 aa3.34□□□□□ -1.88
XRCC4-204ENST00000509268 CCDC9Q9Y3X0 531 aaKnown RBP3.34□□□□□ -1.88
XRCC4-204ENST00000509268 PPEF2O14830 753 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 GLRX3O76003 335 aaKnown RBP3.33□□□□□ -1.88
XRCC4-204ENST00000509268 GPANK1O95872 356 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 PFKMP08237 780 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 CKBP12277 381 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 FGFR4P22455 802 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 KRTAP27-1Q3LI81 207 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 TSTD2Q5T7W7 516 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 KAZNQ674X7 775 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 NEK8Q86SG6 692 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 MDM1Q8TC05 714 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 ADAMTS15Q8TE58 950 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 SNX33Q8WV41 574 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 RSAD2Q8WXG1 361 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 HMCESQ96FZ2 354 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 GMLQ99445 158 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 ZSWIM1Q9BR11 485 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 GPRC5DQ9NZD1 345 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 B4GALT6Q9UBX8 382 aa3.33□□□□□ -1.88
XRCC4-204ENST00000509268 ZBTB7CA1YPR0 619 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 ELL2O00472 640 aaPredicted RBP3.32□□□□□ -1.88
XRCC4-204ENST00000509268 CD1AP06126 327 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 GCSHP23434 173 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 CD40P25942 277 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 CERS1P27544 350 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 CRHR1P34998 444 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 LRRC32Q14392 662 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 MFSD14BQ5SR56 506 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 TMCO4Q5TGY1 634 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 TRIM39Q9HCM9 518 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 TOMM22Q9NS69 142 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 FAM30AQ9NZY2 134 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 KDM2BQ8NHM5 1336 aa3.32□□□□□ -1.88
XRCC4-204ENST00000509268 FAM221BA6H8Z2 402 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 YY2O15391 372 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 LATS1O95835 1130 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 SLC44A4Q53GD3 710 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 SUMO4Q6EEV6 95 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 DRC7Q8IY82 874 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 SLC43A3Q8NBI5 491 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 TMEM79Q9BSE2 394 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 TINF2Q9BSI4 451 aa3.31□□□□□ -1.88
XRCC4-204ENST00000509268 KIAA1522Q9P206 1035 aaPredicted RBP3.31□□□□□ -1.88
XRCC4-204ENST00000509268 MTO1Q9Y2Z2 717 aaKnown RBP3.31□□□□□ -1.88
XRCC4-204ENST00000509268 IGKV2D-30A0A075B6S6 120 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 CCDC187A0A096LP49 1063 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 CXorf49A8MYA2 514 aaPredicted RBP3.3□□□□□ -1.88
XRCC4-204ENST00000509268 PRAMEF4O60810 478 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 NR4A2P43354 598 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 MAPK10P53779 464 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 TFF2Q03403 129 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 PRAMEF14Q5SWL7 426 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 VWA1Q6PCB0 445 aa3.3□□□□□ -1.88
XRCC4-204ENST00000509268 PEG10Q86TG7 708 aaKnown RBP3.3□□□□□ -1.88
XRCC4-204ENST00000509268 KRT73Q86Y46 540 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms