RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 RNF135Q8IUD6 432 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 RNF168Q8IYW5 571 aaPredicted RBP20.43■□□□□ 0.86
UBE3D-207ENST00000509102 KRI1Q8N9T8 703 aaKnown RBP20.43■□□□□ 0.86
UBE3D-207ENST00000509102 KHSRPQ92945 711 aaKnown RBP eCLIP20.43■□□□□ 0.866e-7■■■□□ 17.2
UBE3D-207ENST00000509102 UROC1Q96N76 676 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 PTPRHQ9HD43 1115 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 CHST7Q9NS84 486 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 STK17AQ9UEE5 414 aa20.43■□□□□ 0.86
UBE3D-207ENST00000509102 C5orf42Q9H799 3197 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 NPHP3-ACAD11A0A0J9YXS1 232 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 F8W810 466 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 CLDN3O15551 220 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 DDIT3P35638 169 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 NCKAP1LP55160 1127 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 NOLC1Q14978 699 aaKnown RBP eCLIP20.42■□□□□ 0.86
UBE3D-207ENST00000509102 ARSHQ5FYA8 562 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 GLRA4Q5JXX5 417 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 KIAA0319Q5VV43 1072 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 FAM173BQ6P4H8 233 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 PDXDC1Q6P996 788 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 HAUS6Q7Z4H7 955 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 RIN2Q8WYP3 895 aaPredicted RBP20.42■□□□□ 0.86
UBE3D-207ENST00000509102 RABGGTAQ92696 567 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 ZNF396Q96N95 335 aaPredicted RBP20.42■□□□□ 0.86
UBE3D-207ENST00000509102 GPR62Q9BZJ7 368 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 RXFP1Q9HBX9 757 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 TSHZ2Q9NRE2 1034 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 BLOC1S4Q9NUP1 217 aa20.42■□□□□ 0.86
UBE3D-207ENST00000509102 FBXO2Q9UK22 296 aaPredicted RBP20.42■□□□□ 0.86
UBE3D-207ENST00000509102 MYH11P35749 1972 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 K7ENM7 598 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 TEX28O15482 410 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 TRAPPC3O43617 180 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 GPR37L1O60883 481 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 KIF4AO95239 1232 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 BRD1O95696 1058 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 EFEMP2O95967 443 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 PROZP22891 400 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 LIG4P49917 911 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 STK38Q15208 465 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 RRAGBQ5VZM2 374 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 CEP120Q8N960 986 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 HASPINQ8TF76 798 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 EPSTI1Q96J88 318 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 TTPALQ9BTX7 342 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
UBE3D-207ENST00000509102 MORC2Q9Y6X9 1032 aaPredicted RBP20.41■□□□□ 0.86
UBE3D-207ENST00000509102 HNRNPDLO14979 420 aaKnown RBP20.4■□□□□ 0.86
UBE3D-207ENST00000509102 TRAK2O60296 914 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 B3GAT3O94766 335 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 C1RP00736 705 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 SLC39A14Q15043 492 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 KYAT1Q16773 422 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 HERC4Q5GLZ8 1057 aaPredicted RBP20.4■□□□□ 0.86
UBE3D-207ENST00000509102 SPECC1Q5M775 1068 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 FAM171A1Q5VUB5 890 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 DCLRE1AQ6PJP8 1040 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 TMC5Q6UXY8 1006 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 CCDC73Q6ZRK6 1079 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 CEP57Q86XR8 500 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 C12orf76Q8N812 135 aaPredicted RBP20.4■□□□□ 0.86
UBE3D-207ENST00000509102 DDX27Q96GQ7 796 aaKnown RBP20.4■□□□□ 0.86
UBE3D-207ENST00000509102 PPP1R10Q96QC0 940 aaKnown RBP20.4■□□□□ 0.86
UBE3D-207ENST00000509102 USP28Q96RU2 1077 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 PAAF1Q9BRP4 392 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 MAN1C1Q9NR34 630 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 CACNG4Q9UBN1 327 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 MUTYHQ9UIF7 546 aa20.4■□□□□ 0.86
UBE3D-207ENST00000509102 SMIM28A0A1B0GU29 152 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 TMEM189-UBE2V1I3L0A0 370 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 COL9A1P20849 921 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 ZNF131P52739 623 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 NAB2Q15742 525 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 C15orf39Q6ZRI6 1047 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 SV2BQ7L1I2 683 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 HDAC7Q8WUI4 952 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 B3GALT6Q96L58 329 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 SNX27Q96L92 541 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 CLIC6Q96NY7 704 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 LRFN3Q9BTN0 628 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 PLEKHA4Q9H4M7 779 aa20.39■□□□□ 0.85
UBE3D-207ENST00000509102 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.39■□□□□ 0.85
UBE3D-207ENST00000509102 FAM86C2PA6NEL3 165 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 PRR33A8MZF0 331 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 MCL1Q07820 350 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 CYP26C1Q6V0L0 522 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.38■□□□□ 0.85
UBE3D-207ENST00000509102 KCNN1Q92952 543 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 POMKQ9H5K3 350 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 TBX20Q9UMR3 447 aa20.38■□□□□ 0.85
UBE3D-207ENST00000509102 KCNE1P15382 129 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 SP100P23497 879 aaPredicted RBP20.37■□□□□ 0.85
UBE3D-207ENST00000509102 STAT6P42226 847 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 NASPP49321 788 aaPredicted RBP20.37■□□□□ 0.85
UBE3D-207ENST00000509102 CLCNKBP51801 687 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 PSMD5Q16401 504 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 XKR4Q5GH76 650 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 ALKAL1Q6UXT8 129 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 CCDC149Q6ZUS6 474 aa20.37■□□□□ 0.85
UBE3D-207ENST00000509102 USP49Q70CQ1 688 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms