RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 CDK5RAP3Q96JB5 506 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 AK8Q96MA6 479 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 NTPCRQ9BSD7 190 aaKnown RBP14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 KMT5AQ9NQR1 393 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 EPS15L1Q9UBC2 864 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 DUSP12Q9UNI6 340 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 MYH11P35749 1972 aa14.94□□□□□ -0.02
CCHCR1-227ENST00000508852 CASTOR2A6NHX0 329 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 PTGESO14684 152 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 XYLBO75191 536 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ZMYND10O75800 440 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 POU2F2P09086 479 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 MCF2P10911 925 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 GBP2P32456 591 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ABCD1P33897 745 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 GRM5P41594 1212 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 NPTX2P47972 431 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ATP2C1P98194 919 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 STRN3Q13033 797 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 PSMD5Q16401 504 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 HYIQ5T013 277 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ASTLQ6HA08 431 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 RINT1Q6NUQ1 792 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 KANK3Q6NY19 840 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 PRSS33Q8NF86 280 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 SPIRE2Q8WWL2 714 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ACO2Q99798 780 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 KCNK12Q9HB15 430 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 ARHGAP28Q9P2N2 729 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 GDAQ9Y2T3 454 aa14.93□□□□□ -0.02
CCHCR1-227ENST00000508852 CITO14578 2027 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 GALR2O43603 387 aaPredicted RBP14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 HIP1RO75146 1068 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 KIF4AO95239 1232 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 ASGR2P07307 311 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 NBR1Q14596 966 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 NAB2Q15742 525 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 ZNF568Q3ZCX4 644 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 IER5LQ5T953 404 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 NT5DC1Q5TFE4 455 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 ANKS3Q6ZW76 656 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 C1orf186Q6ZWK4 172 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 CEP57Q86XR8 500 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 LNX1Q8TBB1 728 aaPredicted RBP14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 TMX3Q96JJ7 454 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 PPP1R10Q96QC0 940 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 RTP3Q9BQQ7 232 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 TCHPQ9BT92 498 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 FBXW11Q9UKB1 542 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 FBXL21Q9UKT6 434 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 WDFY4Q6ZS81 3184 aa14.92□□□□□ -0.02
CCHCR1-227ENST00000508852 TRIP11Q15643 1979 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 TTLL13PA6NNM8 815 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 E9PMD0 336 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 F8W810 466 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 B3GAT3O94766 335 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 RPL9P32969 192 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 RAB33AQ14088 237 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 KYAT1Q16773 422 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 XKR4Q5GH76 650 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 RTP2Q5QGT7 225 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 PPM1LQ5SGD2 360 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 EEF1DP3Q658K8 133 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 MPZL3Q6UWV2 235 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 SYT2Q8N9I0 419 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 ZNF707Q96C28 371 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 ACAP3Q96P50 834 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 CLSTN3Q9BQT9 956 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 KIFC3Q9BVG8 833 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 PTPRHQ9HD43 1115 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 LARSQ9P2J5 1176 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 WNT16Q9UBV4 365 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 SMC3Q9UQE7 1217 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 BACE2Q9Y5Z0 518 aa14.91□□□□□ -0.02
CCHCR1-227ENST00000508852 SMIM28A0A1B0GU29 152 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 RFPL2O75678 378 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 PLS3P13797 630 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 KCNE1P15382 129 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 FGFR3P22607 806 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 GJB2P29033 226 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 VCPP55072 806 aaKnown RBP14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 TCF15Q12870 199 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 UPP1Q16831 310 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 ALKAL1Q6UXT8 129 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 ZPBP2Q6X784 338 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 HASPINQ8TF76 798 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 ATOH1Q92858 354 aaPredicted RBP14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 KCNN1Q92952 543 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 CALML4Q96GE6 196 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 B3GALT6Q96L58 329 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 TSPAN18Q96SJ8 248 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 PAAF1Q9BRP4 392 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 MTRRQ9UBK8 725 aa14.9□□□□□ -0.02
CCHCR1-227ENST00000508852 H7C4K7 107 aa14.89□□□□□ -0.03
CCHCR1-227ENST00000508852 TOM1L1O75674 476 aa14.89□□□□□ -0.03
CCHCR1-227ENST00000508852 SRFP11831 508 aa14.89□□□□□ -0.03
CCHCR1-227ENST00000508852 LAMP2P13473 410 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms