RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 SHOX2O60902 331 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ARIH2O95376 493 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 GLRA2P23416 452 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 VEGFBP49765 207 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 MXI1P50539 228 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 SOX10P56693 466 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 INHBEP58166 350 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 STRN3Q13033 797 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 HLTFQ14527 1009 aaKnown RBP eCLIP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 KRT39Q6A163 491 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 PHLDB3Q6NSJ2 640 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 MAATS1Q7Z4T9 603 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 GPD1LQ8N335 351 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 TSEN2Q8NCE0 465 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 PLEKHO2Q8TD55 490 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 AGPAT1Q99943 283 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 TMEM117Q9H0C3 514 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 GOLPH3Q9H4A6 298 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 TMEM8AQ9HCN3 771 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 SIP14410 1827 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 GOLGA6L10A0A0M3HER8 536 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ESYT3A0FGR9 886 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 SORBS3O60504 671 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 BUB1BO60566 1050 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 LRRN2O75325 713 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ABCB4P21439 1286 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 HADHBP55084 474 aaKnown RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 SREBF2Q12772 1141 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 LY6KQ17RY6 165 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 SLFN12LQ6IEE8 588 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 CBWD2Q8IUF1 395 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 POMGNT1Q8WZA1 660 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 LRRC45Q96CN5 670 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ZIM3Q96PE6 472 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 CARD9Q9H257 536 aa12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 UBE2TQ9NPD8 197 aaPredicted RBP12.44□□□□□ -0.42
PRPF40B-203ENST00000508736 ZSCAN5CA6NGD5 496 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 FOXN3O00409 490 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 IGF2BP3O00425 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 NOP56O00567 594 aaKnown RBP12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 CYP2C8P10632 490 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 GCLMP48507 274 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 GPC3P51654 580 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 CLDN10P78369 228 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 CYP24A1Q07973 514 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 ZNF792Q3KQV3 632 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 C11orf63Q6NUN7 778 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 DNAAF5Q86Y56 855 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 IFNL1Q8IU54 200 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 CD302Q8IX05 232 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 ZSWIM2Q8NEG5 633 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 ATP8B4Q8TF62 1192 aa12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 JPH2Q9BR39 696 aaPredicted RBP12.43□□□□□ -0.42
PRPF40B-203ENST00000508736 IGKV6-21A0A0C4DH24 114 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 GOLGA6L10A6NI86 522 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 MIF4GDA9UHW6 222 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 SART1O43290 800 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 EXTL3O43909 919 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 LDHAP00338 332 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 HSPA9P38646 679 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 TM4SF4P48230 202 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 LIG4P49917 911 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 GUCY2FP51841 1108 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 TCEAL1Q15170 157 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 HSDL1Q3SXM5 330 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 IER5Q5VY09 327 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 DHX37Q8IY37 1157 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 IQCKQ8N0W5 287 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 C1orf131Q8NDD1 294 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 DEPTORQ8TB45 409 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ASAP3Q8TDY4 903 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 TCP11Q8WWU5 503 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 TMEM143Q96AN5 459 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 BICD1Q96G01 975 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM81BQ96LP2 452 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 AP1M1Q9BXS5 423 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 EFCC1Q9HA90 598 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 VTA1Q9NP79 307 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 OSGEPQ9NPF4 335 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 RBM47A0AV96 593 aaKnown RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 GOLGA8IPA6NC78 632 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ZNF233A6NK53 670 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 GOLGA8JA6NMD2 632 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 K7ERI5 159 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ADCY3O60266 1144 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 ZC3H11AO75152 810 aaKnown RBP eCLIP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 PPFIA4O75335 1185 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM153BP0C7A2 387 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 EFNA5P52803 228 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 MFAP3P55082 362 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 MXD4Q14582 209 aaPredicted RBP12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 PTPROQ16827 1216 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 FAM153CQ494X1 144 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 WDR78Q5VTH9 848 aa12.42□□□□□ -0.42
PRPF40B-203ENST00000508736 LRIG3Q6UXM1 1119 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms