RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 DAGLBQ8NCG7 672 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 PIK3R5Q8WYR1 880 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 CPB2Q96IY4 423 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 CLSTN3Q9BQT9 956 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 PHF20Q9BVI0 1012 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 TRIM6Q9C030 488 aaPredicted RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 NXF3Q9H4D5 531 aaKnown RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 DDX25Q9UHL0 483 aaKnown RBP10.45□□□□□ -0.74
NEDD9-211ENST00000508546 KCNH3Q9ULD8 1083 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 TICRRQ7Z2Z1 1910 aa10.45□□□□□ -0.74
NEDD9-211ENST00000508546 COL4A2P08572 1712 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 SRRM3A6NNA2 597 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 TAF4O00268 1085 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 SLC37A4O43826 429 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 CPA1P15085 419 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 ARF4P18085 180 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 CD72P21854 359 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 YWHABP31946 246 aaKnown RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 FZD5Q13467 585 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 TFDP1Q14186 410 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 HSP90AA2PQ14568 343 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 EPHA7Q15375 998 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 NPY5RQ15761 445 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 PSMD5Q16401 504 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 AMHR2Q16671 573 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 UVSSAQ2YD98 709 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 BMP2KLQ5H9B9 411 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 LAIR1Q6GTX8 287 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 GALNT17Q6IS24 598 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 PDXDC1Q6P996 788 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 MAMSTRQ6ZN01 415 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 NPAS3Q8IXF0 933 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 ITFG1Q8TB96 612 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 LNX1Q8TBB1 728 aaPredicted RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 KCNB2Q92953 911 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 MTRQ99707 1265 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 TTPALQ9BTX7 342 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 APOL6Q9BWW8 343 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 NFKBIZQ9BYH8 718 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 KCNMB3Q9NPA1 279 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 SEMA4GQ9NTN9 838 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 MRPS17Q9Y2R5 130 aaKnown RBP10.44□□□□□ -0.74
NEDD9-211ENST00000508546 AKAP13Q12802 2813 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 GREB1Q4ZG55 1949 aa10.44□□□□□ -0.74
NEDD9-211ENST00000508546 CYSRT1A8MQ03 144 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 INO80B-WBP1J3KQ70 363 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 CCL16O15467 120 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 LRP3O75074 770 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 ECI2O75521 394 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 AKAP5P24588 427 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 EVCP57679 992 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 MBTD1Q05BQ5 628 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 ADCY1Q08828 1119 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 ELAVL2Q12926 359 aaKnown RBP10.43□□□□□ -0.74
NEDD9-211ENST00000508546 TUSC3Q13454 348 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 XKR9Q5GH70 373 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 AXDND1Q5T1B0 1012 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-211ENST00000508546 FAM171A1Q5VUB5 890 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 PPP4R3AQ6IN85 833 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 SLC27A1Q6PCB7 646 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 BLOC1S2Q6QNY1 142 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 ZNF852Q6ZMS4 543 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 TPRG1Q6ZUI0 275 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 TRIM22Q8IYM9 498 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 DDX1Q92499 740 aaKnown RBP10.43□□□□□ -0.74
NEDD9-211ENST00000508546 RABGGTAQ92696 567 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 LXNQ9BS40 222 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 IER2Q9BTL4 223 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 XPNPEP1Q9NQW7 623 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 BMP2KQ9NSY1 1161 aaPredicted RBP10.43□□□□□ -0.74
NEDD9-211ENST00000508546 POLIQ9UNA4 740 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 UNC79Q9P2D8 2635 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 DMXL2Q8TDJ6 3036 aa10.43□□□□□ -0.74
NEDD9-211ENST00000508546 SDK1Q7Z5N4 2213 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 BPTFQ12830 3046 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 A0A1B0GUA9 196 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 SHISA7A6NL88 538 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 TBX3O15119 743 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 TDGF1P13385 188 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 GCFC2P16383 781 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 PDIA3P30101 505 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 NRLP54845 237 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 MTAPQ13126 283 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 CAPSQ13938 189 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 RAB33AQ14088 237 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 INF2Q27J81 1249 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 PABPC1LQ4VXU2 614 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 KRT25Q7Z3Z0 450 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 CELF5Q8N6W0 485 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 SLC7A14Q8TBB6 771 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 DNASE1L2Q92874 299 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 JAKMIP1Q96N16 626 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 PAAF1Q9BRP4 392 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 SLKQ9H2G2 1235 aaPredicted RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 CHRDQ9H2X0 955 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 ZSWIM4Q9H7M6 989 aa10.42□□□□□ -0.74
NEDD9-211ENST00000508546 NCOA5Q9HCD5 579 aaKnown RBP10.42□□□□□ -0.74
NEDD9-211ENST00000508546 AVENQ9NQS1 362 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms