RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
NUP54-206ENST00000508465 ADAM29Q9UKF5 820 aa5.49□□□□□ -1.53
NUP54-206ENST00000508465 GAKO14976 1311 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 PDS5AQ29RF7 1337 aaKnown RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 NPIPB8E9PQR5 432 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 MEFVO15553 781 aaPredicted RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 CA12O43570 354 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 TADA3O75528 432 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 DGKIO75912 1065 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 MAP4K4O95819 1239 aaPredicted RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 LRG1P02750 347 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 IRX6P78412 446 aaPredicted RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 PURAQ00577 322 aaKnown RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 LSAMPQ13449 338 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 RRP1BQ14684 758 aaKnown RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 MAPKAPK5Q8IW41 473 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 MAGEB6Q8N7X4 407 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.48□□□□□ -1.53
NUP54-206ENST00000508465 TGFBRAP1Q8WUH2 860 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 BRI3BPQ8WY22 251 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 NOL10Q9BSC4 688 aaKnown RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 IDI2Q9BXS1 227 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 CHMP4BQ9H444 224 aaKnown RBP5.48□□□□□ -1.53
NUP54-206ENST00000508465 DCTPP1Q9H773 170 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 C11orf21Q9P2W6 132 aa5.48□□□□□ -1.53
NUP54-206ENST00000508465 CASP8AP2Q9UKL3 1982 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 PAPPA2Q9BXP8 1791 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 MYH13Q9UKX3 1938 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 CCL15-CCL14A0A0B4J2E2 113 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 MANSC4A6NHS7 340 aaPredicted RBP5.47□□□□□ -1.53
NUP54-206ENST00000508465 ENTPD3O75355 529 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 BAG3O95817 575 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 SREBF2Q12772 1141 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 NCAPHQ15003 741 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 CCL15Q16663 113 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 SHROOM1Q2M3G4 852 aaPredicted RBP5.47□□□□□ -1.53
NUP54-206ENST00000508465 EMC4Q5J8M3 183 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 SLC9C2Q5TAH2 1124 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 TMC5Q6UXY8 1006 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 RALYLQ86SE5 291 aaKnown RBP5.47□□□□□ -1.53
NUP54-206ENST00000508465 GIMAP8Q8ND71 665 aaPredicted RBP5.47□□□□□ -1.53
NUP54-206ENST00000508465 EXOC6Q8TAG9 804 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 PHOSPHO1Q8TCT1 267 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 OTUD7AQ8TE49 926 aaPredicted RBP5.47□□□□□ -1.53
NUP54-206ENST00000508465 HOOK2Q96ED9 719 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 MRGPRX3Q96LB0 322 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 LRRCC1Q9C099 1032 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 MEGF9Q9H1U4 602 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.47□□□□□ -1.53
NUP54-206ENST00000508465 ZNF112Q9UJU3 913 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 ZHX2Q9Y6X8 837 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 CENPFP49454 3210 aa5.47□□□□□ -1.53
NUP54-206ENST00000508465 AK9Q5TCS8 1911 aa5.46□□□□□ -1.53
NUP54-206ENST00000508465 MYH2Q9UKX2 1941 aa5.46□□□□□ -1.53
NUP54-206ENST00000508465 UNCXA6NJT0 531 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 CCDC85CA6NKD9 419 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 BTBD19C9JJ37 291 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 CPP00450 1065 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 SNRPB2P08579 225 aaKnown RBP5.46□□□□□ -1.54
NUP54-206ENST00000508465 ZBTB48P10074 688 aaPredicted RBP5.46□□□□□ -1.54
NUP54-206ENST00000508465 PDE6AP16499 860 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ZNF16P17020 682 aaPredicted RBP5.46□□□□□ -1.54
NUP54-206ENST00000508465 ATP5JP18859 108 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ECI1P42126 302 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 INHBEP58166 350 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ABHD18Q0P651 414 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 MAP3K12Q12852 859 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 CRHR2Q13324 411 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 NRN1LQ496H8 165 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ANKRD45Q5TZF3 282 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ERO1BQ86YB8 467 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 TRIM48Q8IWZ4 208 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 FAM43AQ8N2R8 423 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 RASGRP4Q8TDF6 673 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 GPRASP2Q96D09 838 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 LMF1Q96S06 567 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 OSBPL5Q9H0X9 879 aaPredicted RBP5.46□□□□□ -1.54
NUP54-206ENST00000508465 SMOC1Q9H4F8 434 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 EPB41L1Q9H4G0 881 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 PAG1Q9NWQ8 432 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 SAGE1Q9NXZ1 904 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 HSPBP1Q9NZL4 362 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 MYOTQ9UBF9 498 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 PCDHA2Q9Y5H9 948 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 ZNF532Q9HCE3 1301 aa5.46□□□□□ -1.54
NUP54-206ENST00000508465 TCRBV5S4A2TA0A5A2 114 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 TRIM75PA6NK02 468 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 SMIM22K7EJ46 135 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 KRIT1O00522 736 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 PRKAB2O43741 272 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 IGHDP01880 384 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 CYP2D6P10635 497 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 CETPP11597 493 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 PLCD1P51178 756 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 PPIL2Q13356 520 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 SNAPC2Q13487 334 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 MOGSQ13724 837 aa5.45□□□□□ -1.54
NUP54-206ENST00000508465 SMN1Q16637 294 aaKnown RBP5.45□□□□□ -1.54
NUP54-206ENST00000508465 MIIPQ5JXC2 388 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms