RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 RNF43Q68DV7 783 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 RFWD3Q6PCD5 774 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 SPOCK2Q92563 424 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 STMN2Q93045 179 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CNOT7Q9UIV1 285 aaKnown RBP13.54□□□□□ -0.24
DDR1-262ENST00000508312 ABCB11O95342 1321 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 TMEM150BA6NC51 233 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ECE2O60344 883 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 SORBS3O60504 671 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 KRT36O76013 467 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 IMPDH2P12268 514 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 UCHL3P15374 230 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 KCNA4P22459 653 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ATP5DP30049 168 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CLK2P49760 499 aaKnown RBP13.54□□□□□ -0.24
DDR1-262ENST00000508312 RASSF2P50749 326 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 POLGP54098 1239 aaPredicted RBP13.54□□□□□ -0.24
DDR1-262ENST00000508312 ARHGAP44Q17R89 818 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 DCAF12L1Q5VU92 463 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 BTNL9Q6UXG8 535 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ZNF365Q70YC5 407 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 IRF2BP2Q7Z5L9 587 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 SLC35G2Q8TBE7 412 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 FBXO41Q8TF61 875 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 PLEKHG4BQ96PX9 1271 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CRAMP1Q96RY5 1269 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CSRNP1Q96S65 589 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 CARD9Q9H257 536 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.54□□□□□ -0.24
DDR1-262ENST00000508312 GRHL1Q9NZI5 618 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 PRKAG3Q9UGI9 489 aa13.54□□□□□ -0.24
DDR1-262ENST00000508312 ESYT2A0FGR8 921 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 MAPK13O15264 365 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 ATP5HO75947 161 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 TJP3O95049 919 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 APBA3O96018 575 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 HOXA10P31260 410 aaPredicted RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 MYBPC3Q14896 1274 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 MTFR1Q15390 333 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 HS2ST1Q7LGA3 356 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 HES6Q96HZ4 224 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 HOMER2Q9NSB8 354 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CHKBQ9Y259 395 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 SUGT1Q9Y2Z0 365 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 MAGEA13PA6NCF6 341 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 SPAG7O75391 227 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 AKAP3O75969 853 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 TRIM49P0CI25 452 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 TRIM49CP0CI26 452 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 HOXD13P35453 343 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CYP2J2P51589 502 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 DHX34Q14147 1143 aaKnown RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 CCDC137Q6PK04 289 aaKnown RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 C15orf52Q6ZUT6 534 aaKnown RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 ATL2Q8NHH9 583 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 SPIRE2Q8WWL2 714 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CTNNBL1Q8WYA6 563 aaPredicted RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 GANQ9H2C0 597 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CDC42EP4Q9H3Q1 356 aaKnown RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 ZWILCHQ9H900 591 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 SLCO1B3Q9NPD5 702 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 PITPNM2Q9BZ72 1349 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 ANKRD63C9JTQ0 380 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 MARK3P27448 753 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CDR2Q01850 454 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 STRN3Q13033 797 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 ABCB5Q2M3G0 1257 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 KRT27Q7Z3Y8 459 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 FAM136AQ96C01 138 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 RUNDC3BQ96NL0 473 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 DHX36Q9H2U1 1008 aaKnown RBP13.53□□□□□ -0.24
DDR1-262ENST00000508312 PARP2Q9UGN5 583 aa13.53□□□□□ -0.24
DDR1-262ENST00000508312 CDK5RAP2Q96SN8 1893 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 BTNL10A8MVZ5 291 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 RARGP13631 454 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 CCNFP41002 786 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 VPS41P49754 854 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 ZCWPW2Q504Y3 356 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 SCYL3Q8IZE3 742 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 RBM46Q8TBY0 533 aaKnown RBP13.52□□□□□ -0.24
DDR1-262ENST00000508312 STXBP5LQ9Y2K9 1186 aa13.52□□□□□ -0.24
DDR1-262ENST00000508312 BZW2Q9Y6E2 419 aaKnown RBP13.52□□□□□ -0.24
DDR1-262ENST00000508312 MSH4O15457 936 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 MAP3K7O43318 606 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 SPATA31C1P0DKV0 1188 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 FOXN2P32314 431 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 IL9RQ01113 521 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 PPP2R5EQ16537 467 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 CNPY1Q3B7I2 92 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 TAF1BQ53T94 588 aaPredicted RBP13.52□□□□□ -0.25
DDR1-262ENST00000508312 WASHC2DQ5SRD0 308 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 DSTYKQ6XUX3 929 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 LRRC74BQ6ZQY2 392 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 ALG3Q92685 438 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 MCUR1Q96AQ8 359 aa13.52□□□□□ -0.25
DDR1-262ENST00000508312 MRRFQ96E11 262 aaKnown RBP13.52□□□□□ -0.25
DDR1-262ENST00000508312 GCNT4Q9P109 453 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms