RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 THP07101 528 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 NR2C2P49116 596 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 CCR9P51686 369 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 CREB5Q02930 508 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 MAP4K2Q12851 820 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 POLD3Q15054 466 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 ANO6Q4KMQ2 910 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 FAM26FQ5R3K3 315 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 SLC2A7Q6PXP3 512 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 GBP7Q8N8V2 638 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 ZDHHC1Q8WTX9 485 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 STMN4Q9H169 189 aaPredicted RBP8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 DECR2Q9NUI1 292 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 CLCA2Q9UQC9 943 aa8.11□□□□□ -1.11
PDGFRA-206ENST00000508170 PCF11O94913 1555 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 B4E1Z4 1266 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 H0YAE9 185 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TRAF5O00463 557 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 MAGEB3O15480 346 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 DAB1O75553 588 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 YEATS4O95619 227 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 IFNB1P01574 187 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 RHOXF2BP0C7M4 288 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CKBP12277 381 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 PTPN2P17706 415 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 HTR1BP28222 390 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 SERPINF1P36955 418 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 VEGFBP49765 207 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 AGFG1P52594 562 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 ERVK-9P63128 1117 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 MC1RQ01726 317 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CUL4BQ13620 913 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 UBE3CQ15386 1083 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 PROX2Q3B8N5 592 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 ACAD10Q6JQN1 1059 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 OR10H5Q8NGA6 315 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 OR56B2PQ8NGI1 322 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 BRI3BPQ8WY22 251 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 RHOXF2Q9BQY4 288 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 BTBD1Q9H0C5 482 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 MMADHCQ9H3L0 296 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 DCP1AQ9NPI6 582 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 SNTG1Q9NSN8 517 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TMEM160Q9NX00 188 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 LRP2BPQ9P2M1 347 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 AGO2Q9UKV8 859 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TMEM5Q9Y2B1 443 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 PASKQ96RG2 1323 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TDRD9Q8NDG6 1382 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TBX1O43435 398 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 ITGAVP06756 1048 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TPM1P09493 284 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CSH1P0DML2 217 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CSH2P0DML3 217 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 S100A5P33763 92 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 MLH1P40692 756 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 NUCB2P80303 420 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 RUNX1T1Q06455 604 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 NR5A1Q13285 461 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 STK11Q15831 433 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 ZYG11AQ6WRX3 759 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 RNF152Q8N8N0 203 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 FAM71DQ8N9W8 422 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 GMCL1P1Q8NEA9 526 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 SLC5A5Q92911 643 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 LRRC45Q96CN5 670 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 OCEL1Q9H607 264 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 EPS8L2Q9H6S3 715 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CCM2LQ9NUG4 571 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 SEPT11Q9NVA2 429 aaKnown RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 CTTNBP2Q8WZ74 1663 aa8.1□□□□□ -1.11
PDGFRA-206ENST00000508170 WDR97A6NE52 1622 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 SYT5O00445 386 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 CETN3O15182 167 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 CAMTA2O94983 1202 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 RARBP10826 455 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 NNMTP40261 264 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 DNM2P50570 870 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 STARD6P59095 220 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 SLC35G1Q2M3R5 365 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 C4orf48Q5BLP8 95 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 TTC19Q6DKK2 380 aaPredicted RBP8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 PM20D1Q6GTS8 502 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 MTFR2Q6P444 385 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 TSPYL5Q86VY4 417 aaPredicted RBP8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 ZNF227Q86WZ6 799 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 SRBD1Q8N5C6 995 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 OR52K1Q8NGK4 314 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 MAP7D2Q96T17 732 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 TXN2Q99757 166 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 NOL6Q9H6R4 1146 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 TMEM165Q9HC07 324 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 SEMA3GQ9NS98 782 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 PPP1R14DQ9NXH3 145 aa8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 USP36Q9P275 1121 aaKnown RBP8.09□□□□□ -1.11
PDGFRA-206ENST00000508170 DNAJB9Q9UBS3 223 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms