RNA–Protein interactions for RNA: ENST00000508130.5

SLF1-207, Transcript of SMC5-SMC6 complex localization factor 1, humanhuman

TSL 2

Gene SLF1, Length 1,079 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1-207ENST00000508130 NGEFQ8N5V2 710 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 JDP2Q8WYK2 163 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 PTPRN2Q92932 1015 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 RUNDC1Q96C34 613 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 ZNF764Q96H86 408 aaPredicted RBP4.49□□□□□ -1.69
SLF1-207ENST00000508130 RBM17Q96I25 401 aaKnown RBP4.49□□□□□ -1.69
SLF1-207ENST00000508130 SLC6A15Q9H2J7 730 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 RNF181Q9P0P0 153 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 SRP68Q9UHB9 627 aaKnown RBP4.49□□□□□ -1.69
SLF1-207ENST00000508130 TSPYL4Q9UJ04 414 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 NIP7Q9Y221 180 aaKnown RBP eCLIP4.49□□□□□ -1.69
SLF1-207ENST00000508130 RRP7AQ9Y3A4 280 aaKnown RBP4.49□□□□□ -1.69
SLF1-207ENST00000508130 RBM8AQ9Y5S9 174 aaKnown RBP4.49□□□□□ -1.69
SLF1-207ENST00000508130 USP16Q9Y5T5 823 aa4.49□□□□□ -1.69
SLF1-207ENST00000508130 GOLGB1Q14789 3259 aaKnown RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 RREB1Q92766 1687 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 LTN1O94822 1766 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 UBE2QL1A1L167 161 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 KLRG2A4D1S0 409 aaPredicted RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 GOLGA8BA8MQT2 603 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 RHOBTB3O94955 611 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 SRGNP10124 158 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 NR4A1P22736 598 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 APEX1P27695 318 aaKnown RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 ERCC5P28715 1186 aaPredicted RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 RABGGTBP53611 331 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 LACTBP83111 547 aaPredicted RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 KLHDC10Q6PID8 442 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 SMIM5Q71RC9 77 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 RHOUQ7L0Q8 258 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 ZC3H7AQ8IWR0 971 aaKnown RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 ELOA2Q8IYF1 753 aaPredicted RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 ZNF276Q8N554 614 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 CISD2Q8N5K1 135 aaKnown RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 ANKRD53Q8N9V6 530 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 SMC1BQ8NDV3 1235 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 SUPT20HQ8NEM7 779 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 ST13P5Q8NFI4 369 aaPredicted RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 RPGRQ92834 1020 aaKnown RBP4.48□□□□□ -1.69
SLF1-207ENST00000508130 TRPS1Q9UHF7 1281 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 PACSIN3Q9UKS6 424 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 ZBTB1Q9Y2K1 713 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 VWA7Q9Y334 891 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 CARMIL3Q8ND23 1372 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 CEMIPQ8WUJ3 1361 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 RGPD5Q99666 1765 aa4.48□□□□□ -1.69
SLF1-207ENST00000508130 MYBBP1AQ9BQG0 1328 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 NUP188Q5SRE5 1749 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 SBF2Q86WG5 1849 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 GOLGA6L22H0YM25 854 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 GSTA4O15217 222 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 FOXP2O15409 715 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 KLF4O43474 513 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 CAMTA2O94983 1202 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 DDX58O95786 925 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 HOXB7P09629 217 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 C6orf222P0C671 652 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 CHRNA5P30532 468 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 TMPOP42166 694 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 BPIFB4P59827 614 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 EIF4A1P60842 406 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 GNAI1P63096 354 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 ADAM8P78325 824 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 ARID5AQ03989 594 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 DDR1Q08345 913 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 CCDC93Q567U6 631 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 FAM47CQ5HY64 1035 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 FAM209AQ5JX71 171 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 FOXB2Q5VYV0 432 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 PNMA8AQ86V59 439 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 GLCCI1Q86VQ1 547 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 NOSTRINQ8IVI9 506 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 PROKR1Q8TCW9 393 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 SREK1Q8WXA9 508 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 ERCC4Q92889 916 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 GCDHQ92947 438 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 LENG9Q96B70 501 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 SLC7A6OSQ96CW6 309 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 PLEKHF1Q96S99 279 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 MNTQ99583 582 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 UTP14AQ9BVJ6 771 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 SPATA9Q9BWV2 254 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 TAOK3Q9H2K8 898 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 KCNH7Q9NS40 1196 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 HYPKQ9NX55 129 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 DBF4Q9UBU7 674 aaPredicted RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 LAS1LQ9Y4W2 734 aaKnown RBP4.47□□□□□ -1.69
SLF1-207ENST00000508130 COL15A1P39059 1388 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 COL4A3Q01955 1670 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 UTRNP46939 3433 aa4.47□□□□□ -1.69
SLF1-207ENST00000508130 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.69
SLF1-207ENST00000508130 MAP3K15Q6ZN16 1313 aa4.46□□□□□ -1.69
SLF1-207ENST00000508130 KDM6AO15550 1401 aaPredicted RBP4.46□□□□□ -1.69
SLF1-207ENST00000508130 BTAF1O14981 1849 aa4.46□□□□□ -1.69
SLF1-207ENST00000508130 CHL1O00533 1208 aa4.46□□□□□ -1.7
SLF1-207ENST00000508130 ANP32CO43423 234 aa4.46□□□□□ -1.7
SLF1-207ENST00000508130 H2AFYO75367 372 aaKnown RBP4.46□□□□□ -1.7
SLF1-207ENST00000508130 CRTAMO95727 393 aa4.46□□□□□ -1.7
SLF1-207ENST00000508130 MYL6BP14649 208 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms