RNA–Protein interactions for RNA: ENST00000507874.5

CLDND1-215, Transcript of claudin domain containing 1, humanhuman

TSL 3 BASIC

Gene CLDND1, Length 1,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-215ENST00000507874 YARSP54577 528 aaKnown RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 GTF2BQ00403 316 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 HSP90AA2PQ14568 343 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 SMAD2Q15796 467 aaKnown RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 E2F4Q16254 413 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 ZC2HC1CQ53FD0 456 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 ANKRD54Q6NXT1 300 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 ALKAL1Q6UXT8 129 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 HASPINQ8TF76 798 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 STAMQ92783 540 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 CHAMP1Q96JM3 812 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 SNX27Q96L92 541 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 KLHL5Q96PQ7 755 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 CD320Q9NPF0 282 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 MRPL17Q9NRX2 175 aaKnown RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 TOPORSQ9NS56 1045 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-215ENST00000507874 CFAP45Q9UL16 551 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
CLDND1-215ENST00000507874 SMIM28A0A1B0GU29 152 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 TADA2AO75478 443 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 KIF4AO95239 1232 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 URODP06132 367 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SRGAP2BP0DMP2 458 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SCP2P22307 547 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 MATR3P43243 847 aaKnown RBP eCLIP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 GLUD2P49448 558 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 LIG4P49917 911 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SLC39A4Q6P5W5 647 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SYCE2Q6PIF2 218 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 MAP4K3Q8IVH8 894 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 TMEM87AQ8NBN3 555 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SLC22A17Q8WUG5 538 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 CASP10Q92851 521 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 DHX58Q96C10 678 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 B3GALT6Q96L58 329 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 ZMAT2Q96NC0 199 aaKnown RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 ST6GALNAC4Q9H4F1 302 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 GOLGA2P5Q9HBQ8 144 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 RCOR1Q9UKL0 485 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 PDCD11Q14690 1871 aaKnown RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 HNRNPDLO14979 420 aaKnown RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 CNPP09543 421 aaKnown RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 IDEP14735 1019 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 IGFBP6P24592 240 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 ME1P48163 572 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 DSG1Q02413 1049 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SOX4Q06945 474 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SLC10A6Q3KNW5 377 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 ZNF720Q7Z2F6 126 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 APOL5Q9BWW9 433 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 EMILIN2Q9BXX0 1053 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 CHST7Q9NS84 486 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 KBTBD4Q9NVX7 518 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 CNTN3Q9P232 1028 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 SEL1LQ9UBV2 794 aa16.51■□□□□ 0.23
CLDND1-215ENST00000507874 USP15Q9Y4E8 981 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-215ENST00000507874 FRMD3A2A2Y4 597 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 PPP1R37O75864 691 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 KCNE1P15382 129 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 EPCAMP16422 314 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 GAP43P17677 238 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 TNFSF9P41273 254 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 CLCNKBP51801 687 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 ZP2Q05996 745 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 BECN1Q14457 450 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 KIAA1841Q6NSI8 718 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 STRA6Q9BX79 667 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 S1PR5Q9H228 398 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 TNMDQ9H2S6 317 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 IKZF4Q9H2S9 585 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 PRKAG3Q9UGI9 489 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 PLXNA3P51805 1871 aa16.5■□□□□ 0.23
CLDND1-215ENST00000507874 XIRP2A4UGR9 3374 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 SF3B1O75533 1304 aaKnown RBP eCLIP16.49■□□□□ 0.23
CLDND1-215ENST00000507874 A0A0B4J269 797 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 TISP43B9A030 160 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 ANKRD63C9JTQ0 380 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 OGTO15294 1046 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 FAM189A1O60320 539 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 CXCL8P10145 99 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 HOXB8P17481 243 aaPredicted RBP16.49■□□□□ 0.23
CLDND1-215ENST00000507874 KLRC2P26717 231 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 ABCD1P33897 745 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 USP41Q3LFD5 358 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 ZBTB41Q5SVQ8 909 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 RESP18Q5W5W9 173 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 CD300LGQ6UXG3 332 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 PPFIBP1Q86W92 1011 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 ADHFE1Q8IWW8 467 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 IQUBQ8NA54 791 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 RIN2Q8WYP3 895 aaPredicted RBP16.49■□□□□ 0.23
CLDND1-215ENST00000507874 SUSD6Q92537 303 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 HVCN1Q96D96 273 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 CUEDC2Q9H467 287 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 MRPL44Q9H9J2 332 aaKnown RBP16.49■□□□□ 0.23
CLDND1-215ENST00000507874 RXFP1Q9HBX9 757 aa16.49■□□□□ 0.23
CLDND1-215ENST00000507874 PANK4Q9NVE7 773 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms