RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 PTH1RQ03431 593 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 TLE1Q04724 770 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 MRPL49Q13405 166 aaKnown RBP5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 SNAPC2Q13487 334 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 MTM1Q13496 603 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 UBE4AQ14139 1066 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 KIAA0753Q2KHM9 967 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 DARS2Q6PI48 645 aaKnown RBP5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 C1QL4Q86Z23 238 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 GPR135Q8IZ08 494 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 LRRC37BQ96QE4 947 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 NELFAQ9H3P2 528 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 ARMT1Q9H993 441 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 AGO3Q9H9G7 860 aaKnown RBP5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 USP25Q9UHP3 1055 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 FAM50BQ9Y247 325 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 ACTL7AQ9Y615 435 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 ZMYM3Q14202 1370 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 ATRNL1Q5VV63 1379 aa5.13□□□□□ -1.59
HMGB1P28-201ENST00000507778 ANO9A1A5B4 782 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 HOXA3O43365 443 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 LAMTOR5O43504 91 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 RAP2AP10114 183 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 TYRP14679 529 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 ALOX15P16050 662 aaPredicted RBP5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 BMP7P18075 431 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 FPR1P21462 350 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 FLT3LGP49771 235 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 CACNB3P54284 484 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 CREMQ03060 361 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 FGL2Q14314 439 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 ATP2B3Q16720 1220 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 MFSD14BQ5SR56 506 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 AFMIDQ63HM1 303 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 FAM111BQ6SJ93 734 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 TAX1BP1Q86VP1 789 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 SH2D3CQ8N5H7 860 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 FBXO41Q8TF61 875 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 MTFMTQ96DP5 389 aaKnown RBP5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 SLC35A4Q96G79 324 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 CEP95Q96GE4 821 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 PTPN18Q99952 460 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 PNPOQ9NVS9 261 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 ABCF2Q9UG63 623 aa5.12□□□□□ -1.59
HMGB1P28-201ENST00000507778 CFAP69A5D8W1 941 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 GOLIM4O00461 696 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 APAF1O14727 1248 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 FTH1P19P0C7X4 201 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 ZSCAN22P10073 491 aaPredicted RBP5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 RPS19P39019 145 aaKnown RBP5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 ALDH1A3P47895 512 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 RAB1AP62820 205 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 PICALMQ13492 652 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 PLS1Q14651 629 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 CNN3Q15417 329 aaKnown RBP5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 FLYWCH1Q4VC44 716 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 SYCP2LQ5T4T6 812 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 RNF220Q5VTB9 566 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 SLFN13Q68D06 897 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 OTUD7BQ6GQQ9 843 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 MAEAQ7L5Y9 396 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 C11orf96Q7Z7L8 435 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 PLBD2Q8NHP8 589 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 FEZF2Q8TBJ5 459 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 BORCS6Q96GS4 357 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 PLA2G12BQ9BX93 195 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 WDCPQ9H6R7 721 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 RUVBL1Q9Y265 456 aaKnown RBP5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 DUSP10Q9Y6W6 482 aa5.11□□□□□ -1.59
HMGB1P28-201ENST00000507778 NPEPPSL1A6NEC2 478 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 WNT10BO00744 389 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 ZNF536O15090 1300 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 ATP5JP18859 108 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 CNR2P34972 360 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 RHBDL3P58872 404 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 GRM7Q14831 915 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 FKBP15Q5T1M5 1219 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 IL31Q6EBC2 164 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 PLXDC1Q8IUK5 500 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 SIAH1Q8IUQ4 282 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 GIMAP8Q8ND71 665 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 SVIPQ8NHG7 77 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 TMEM176AQ96HP8 235 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 ZNF512Q96ME7 567 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 MRI1Q9BV20 369 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 ZNF700Q9H0M5 742 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 C11orf54Q9H0W9 315 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 KCNH6Q9H252 994 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 BHMT2Q9H2M3 363 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 CHST12Q9NRB3 414 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 FEZ2Q9UHY8 353 aaPredicted RBP5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
HMGB1P28-201ENST00000507778 B5MCH6 92 aa5.09□□□□□ -1.59
HMGB1P28-201ENST00000507778 NT5C1B-RDH14C9J2C7 533 aa5.09□□□□□ -1.59
HMGB1P28-201ENST00000507778 F2RL2O00254 374 aa5.09□□□□□ -1.59
HMGB1P28-201ENST00000507778 PJA2O43164 708 aa5.09□□□□□ -1.59
HMGB1P28-201ENST00000507778 MGEA5O60502 916 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms