RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 TTC3P53804 2025 aa21.82■■□□□ 1.08
USP53-203ENST00000507597 ARL5CA6NH57 179 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 SLC16A3O15427 465 aaKnown RBP21.81■■□□□ 1.08
USP53-203ENST00000507597 FGFR1P11362 822 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 MLH1P40692 756 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 ENPEPQ07075 957 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 GRIK3Q13003 919 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 SPOUT1Q5T280 376 aaKnown RBP21.81■■□□□ 1.08
USP53-203ENST00000507597 INTS8Q75QN2 995 aaKnown RBP21.81■■□□□ 1.08
USP53-203ENST00000507597 FILIP1Q7Z7B0 1213 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 FAM114A1Q8IWE2 563 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 BRSK2Q8IWQ3 736 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 FIBCD1Q8N539 461 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 RDH13Q8NBN7 331 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 SNX27Q96L92 541 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 CASD1Q96PB1 797 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 GAD1Q99259 594 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 IKZF4Q9H2S9 585 aa21.81■■□□□ 1.08
USP53-203ENST00000507597 R3HCC1Q9Y3T6 440 aaKnown RBP21.81■■□□□ 1.08
USP53-203ENST00000507597 GOLGA8IPA6NC78 632 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 GOLGA8JA6NMD2 632 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 SMTNL1A8MU46 457 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 TULP1O00294 542 aaPredicted RBP21.8■■□□□ 1.08
USP53-203ENST00000507597 CXCL8P10145 99 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 KCNE1P15382 129 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 STX17P56962 302 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 SMAD3P84022 425 aaKnown RBP21.8■■□□□ 1.08
USP53-203ENST00000507597 SLC10A6Q3KNW5 377 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 TTI2Q6NXR4 508 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 KLK14Q9P0G3 267 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 CNTN3Q9P232 1028 aa21.8■■□□□ 1.08
USP53-203ENST00000507597 TNRC18O15417 2968 aaPredicted RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 TTC26A0AVF1 554 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 FAM189A1O60320 539 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 STX10O60499 249 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 ADRB2P07550 413 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 TNFSF9P41273 254 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 AP3M2P53677 418 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 ENOX2Q16206 610 aaKnown RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 LRIT3Q3SXY7 679 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 SEZ6Q53EL9 994 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 XKR4Q5GH76 650 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 CLLU1OSQ5K130 101 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 CRELD2Q6UXH1 353 aaPredicted RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 ALKAL1Q6UXT8 129 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 FAM186BQ8IYM0 893 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 ENOX1Q8TC92 643 aaKnown RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 SAMD11Q96NU1 681 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 MAGEC2Q9UBF1 373 aaPredicted RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 UBQLN1Q9UMX0 589 aaKnown RBP21.79■■□□□ 1.08
USP53-203ENST00000507597 C2CD2Q9Y426 696 aa21.79■■□□□ 1.08
USP53-203ENST00000507597 TRIM49BA6NDI0 452 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 LACTBL1A8MY62 500 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 PSMD6Q15008 389 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 CCDC40Q4G0X9 1142 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 SPATA1Q5VX52 437 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 ZC3H3Q8IXZ2 948 aaKnown RBP21.78■■□□□ 1.08
USP53-203ENST00000507597 TMEM192Q8IY95 271 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 BEST2Q8NFU1 509 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 KIF12Q96FN5 646 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 MFSD14AQ96MC6 490 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 UROC1Q96N76 676 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 BPIFA3Q9BQP9 254 aa21.78■■□□□ 1.08
USP53-203ENST00000507597 SRRTQ9BXP5 876 aaKnown RBP21.78■■□□□ 1.08
USP53-203ENST00000507597 COLQQ9Y215 455 aaPredicted RBP21.78■■□□□ 1.08
USP53-203ENST00000507597 SMIM28A0A1B0GU29 152 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 MEIS3P2A8K0S8 358 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 BECN2A8MW95 431 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 POMCP01189 267 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 ALDH2P05091 517 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 PRKCSHP14314 528 aaPredicted RBP21.77■■□□□ 1.08
USP53-203ENST00000507597 LAG3P18627 525 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 CYP3A5P20815 502 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 SCNN1GP51170 649 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 PMS1P54277 932 aaKnown RBP21.77■■□□□ 1.08
USP53-203ENST00000507597 TPM4P67936 248 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 CYP24A1Q07973 514 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 TMEM132DQ14C87 1099 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 ANO6Q4KMQ2 910 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 PAN2Q504Q3 1202 aaKnown RBP21.77■■□□□ 1.08
USP53-203ENST00000507597 FRMD5Q7Z6J6 570 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 CBWD2Q8IUF1 395 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 TMC2Q8TDI7 906 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 DDX27Q96GQ7 796 aaKnown RBP21.77■■□□□ 1.08
USP53-203ENST00000507597 ANKRD36BP1Q96IX9 119 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 TMEM175Q9BSA9 504 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 DNAJC25Q9H1X3 360 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 RNF19AQ9NV58 838 aa21.77■■□□□ 1.08
USP53-203ENST00000507597 ARMCX3Q9UH62 379 aaPredicted RBP21.77■■□□□ 1.08
USP53-203ENST00000507597 TNNC2P02585 160 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 TMEM191BP0C7N4 346 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 TNNI1P19237 187 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 PAX3P23760 479 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 ALDH7A1P49419 539 aaKnown RBP21.76■■□□□ 1.07
USP53-203ENST00000507597 MYL5Q02045 173 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 TUSC3Q13454 348 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 DUOXA2Q1HG44 320 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 ZBTB41Q5SVQ8 909 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 WDR49Q8IV35 697 aa21.76■■□□□ 1.07
USP53-203ENST00000507597 ANKRD20A12PQ8NF67 263 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms