RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 NETO1Q8TDF5 533 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 NXPE3Q969Y0 559 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 TCEAL4Q96EI5 215 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 MCRS1Q96EZ8 462 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 CCDC136Q96JN2 1154 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 NIFKQ9BYG3 293 aaKnown RBP9.97□□□□□ -0.81
COPS4-205ENST00000507376 NRBP2Q9NSY0 501 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 RBM12Q9NTZ6 932 aaKnown RBP9.97□□□□□ -0.81
COPS4-205ENST00000507376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.97□□□□□ -0.81
COPS4-205ENST00000507376 DNMT3BQ9UBC3 853 aaKnown RBP9.97□□□□□ -0.81
COPS4-205ENST00000507376 TRIP11Q15643 1979 aa9.97□□□□□ -0.81
COPS4-205ENST00000507376 DDX11L8A8MPP1 907 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 ZBTB43O43298 467 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 HRO43593 1189 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 ITGA4P13612 1032 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 CIITAP33076 1130 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 PRKCQQ04759 706 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 ASAP3Q8TDY4 903 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 PRPF31Q8WWY3 499 aaKnown RBP9.96□□□□□ -0.82
COPS4-205ENST00000507376 PGBD4Q96DM1 585 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 SHDQ96IW2 340 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 TEKT3Q9BXF9 490 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 RWDD1Q9H446 243 aaPredicted RBP9.96□□□□□ -0.82
COPS4-205ENST00000507376 XPNPEP1Q9NQW7 623 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 POLR3BQ9NW08 1133 aaPredicted RBP9.96□□□□□ -0.82
COPS4-205ENST00000507376 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 ADAM28Q9UKQ2 775 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 NAP1L2Q9ULW6 460 aaPredicted RBP9.96□□□□□ -0.82
COPS4-205ENST00000507376 USP20Q9Y2K6 914 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 CNTNAP2Q9UHC6 1331 aa9.96□□□□□ -0.82
COPS4-205ENST00000507376 ATG2BQ96BY7 2078 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 I3L4J1 428 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 GIPC1O14908 333 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 SLC37A4O43826 429 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 CCR2P41597 374 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 SOX9P48436 509 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 LAMTOR4Q0VGL1 99 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 PSMD5Q16401 504 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 XKR3Q5GH77 459 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 PPM1LQ5SGD2 360 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 LAIR1Q6GTX8 287 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 TCEAL6Q6IPX3 200 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 FAM43BQ6ZT52 329 aaPredicted RBP9.95□□□□□ -0.82
COPS4-205ENST00000507376 TMEM130Q8N3G9 435 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 RNF149Q8NC42 400 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 TCEAL3Q969E4 200 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 RSPRY1Q96DX4 576 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 ZMYND12Q9H0C1 365 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 CHRDQ9H2X0 955 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 PLEKHA4Q9H4M7 779 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 ANGPTL2Q9UKU9 493 aa9.95□□□□□ -0.82
COPS4-205ENST00000507376 A0A087WWV3 80 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 ESYT2A0FGR8 921 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 TBC1D4O60343 1298 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 NPTXRO95502 500 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 EDN1P05305 212 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 SKIP12755 728 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 GJA1P17302 382 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 RPS9P46781 194 aaKnown RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 PXNP49023 591 aaPredicted RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 JAK3P52333 1124 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 ADCY1Q08828 1119 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 EMC2Q15006 297 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 NECTIN1Q15223 517 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 PABPC1LQ4VXU2 614 aaKnown RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 PKN3Q6P5Z2 889 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 CYP26C1Q6V0L0 522 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 MTSS1LQ765P7 747 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 CEP57Q86XR8 500 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 FAM160A2Q8N612 972 aaPredicted RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 LNX1Q8TBB1 728 aaPredicted RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 ETNPPLQ8TBG4 499 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 RUFY2Q8WXA3 655 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 SECISBP2LQ93073 1101 aaKnown RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 ZSWIM3Q96MP5 696 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 AIFM3Q96NN9 605 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 MTA3Q9BTC8 594 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 OSBPL6Q9BZF3 934 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 SH2B1Q9NRF2 756 aaPredicted RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 RBM28Q9NW13 759 aaKnown RBP9.94□□□□□ -0.82
COPS4-205ENST00000507376 FNIP2Q9P278 1114 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 ZMIZ1Q9ULJ6 1067 aa9.94□□□□□ -0.82
COPS4-205ENST00000507376 hCG_1984214I3L0E3 225 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 K7ESF4 209 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 PTGESO14684 152 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 ZIC2O95409 532 aaPredicted RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 ARF4P18085 180 aaPredicted RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 VIPR2P41587 438 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 EXOSC10Q01780 885 aaKnown RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 MBTD1Q05BQ5 628 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 CAPSQ13938 189 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 SIM2Q14190 667 aaPredicted RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 HSP90AA2PQ14568 343 aaPredicted RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 USP41Q3LFD5 358 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 FAM78AQ5JUQ0 283 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 AXDND1Q5T1B0 1012 aaPredicted RBP9.93□□□□□ -0.82
COPS4-205ENST00000507376 LIN9Q5TKA1 542 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 FAM171A1Q5VUB5 890 aa9.93□□□□□ -0.82
COPS4-205ENST00000507376 TXNDC11Q6PKC3 985 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms