RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ITGA10O75578 1167 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 FKBP9O95302 570 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 ITGAMP11215 1152 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 TYRP1P17643 537 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 CDKN1CP49918 316 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 SEC24CP53992 1094 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 MEF2AQ02078 507 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 GPR158Q5T848 1215 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 FKBP9P1Q75LS8 142 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 PDZD4Q76G19 769 aaPredicted RBP3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 GPRIN1Q7Z2K8 1008 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 C11orf74Q86VG3 221 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 SYT12Q8IV01 421 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 MDM1Q8TC05 714 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 C1QTNF7Q9BXJ2 289 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 TEX101Q9BY14 249 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 BRINP2Q9C0B6 783 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 MS4A5Q9H3V2 200 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 SYBUQ9NX95 663 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 MAP3K2Q9Y2U5 619 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 COL4A3BPQ9Y5P4 624 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 PPP2R3BQ9Y5P8 575 aa3.67□□□□□ -1.82
TOPBP1-205ENST00000506779 ZMYM3Q14202 1370 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PIPSLA2A3N6 862 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 LCHNA4D1U4 455 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ERVV-2B6SEH9 535 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 GPR39O43194 453 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 KDM1AO60341 852 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 C1RP00736 705 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PLA2G5P39877 138 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ABCG1P45844 678 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ZNF81P51508 661 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 IL2P60568 153 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PHC1P78364 1004 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 STRN3Q13033 797 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 MPP3Q13368 585 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 STAT4Q14765 748 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ABHD17BQ5VST6 288 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ATG9BQ674R7 924 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ANKS6Q68DC2 871 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 BTNL9Q6UXG8 535 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 FRMD7Q6ZUT3 714 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 SLC44A3Q8N4M1 653 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 BOLLQ8N9W6 283 aaKnown RBP3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ZNF610Q8N9Z0 462 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 OR14C36Q8NHC7 312 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ZFP28Q8NHY6 868 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 RSAD2Q8WXG1 361 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 ASB10Q8WXI3 467 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 LINC00476Q8WZB0 136 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PHACTR3Q96KR7 559 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 SPATA5L1Q9BVQ7 753 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 WNT8AQ9H1J5 351 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 IFT22Q9H7X7 185 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 KIAA1586Q9HCI6 787 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PCDH12Q9NPG4 1184 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 EVLQ9UI08 416 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 PRSS50Q9UI38 385 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 KCNG1Q9UIX4 513 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 EPN1Q9Y6I3 576 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 NUMBLQ9Y6R0 609 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 FPGT-TNNI3KV9GXZ4 949 aa3.66□□□□□ -1.82
TOPBP1-205ENST00000506779 TBKBP1A7MCY6 615 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ZEB2O60315 1214 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 CDKL5O76039 1030 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 SPDEFO95238 335 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 CNGA1P29973 690 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 SCNN1BP51168 640 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 MANFP55145 182 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ELLP55199 621 aaPredicted RBP3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 FOXI1Q12951 378 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 RESTQ13127 1097 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 TERF2Q15554 542 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 PTPROQ16827 1216 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 SPDYE7PQ495Y7 208 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ARMC6Q6NXE6 501 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 DDX46Q7L014 1031 aaKnown RBP3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 DDX42Q86XP3 938 aaKnown RBP eCLIP3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ZNF480Q8WV37 535 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 USP7Q93009 1102 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ZNF778Q96MU6 729 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 TTC1Q99614 292 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ADAM2Q99965 735 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ANO3Q9BYT9 981 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 GPRC5DQ9NZD1 345 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 TLK1Q9UKI8 766 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ATP11BQ9Y2G3 1177 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 ATP8A1Q9Y2Q0 1164 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 NOX1Q9Y5S8 564 aa3.65□□□□□ -1.83
TOPBP1-205ENST00000506779 K7ESF4 209 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 BRINP1O60477 761 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 TMEM127O75204 238 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 ESRRBO95718 433 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 FOSP01100 380 aaPredicted RBP3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 FDXRP22570 491 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 PTH2RP49190 550 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 CHN2P52757 468 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 BMT2Q1RMZ1 405 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 ATP13A4Q4VNC1 1196 aa3.64□□□□□ -1.83
TOPBP1-205ENST00000506779 C19orf54Q5BKX5 351 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms