RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 ANKFY1Q9P2R3 1169 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 DNAJB4Q9UDY4 337 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 GDAQ9Y2T3 454 aa14.37□□□□□ -0.11
TCOF1-209ENST00000506630 H0Y858 1186 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 RECQL4O94761 1208 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 DDHD2O94830 711 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 NMT1P30419 496 aaKnown RBP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 ANP32AP39687 249 aaKnown RBP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 MPZL3Q6UWV2 235 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 SLC39A11Q8N1S5 342 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 MRPS27Q92552 414 aaKnown RBP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 DNAJC19Q96DA6 116 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 TCHPQ9BT92 498 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 SCAND2PQ9GZW5 306 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 CDT1Q9H211 546 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 GDPD2Q9HCC8 539 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 MIOSQ9NXC5 875 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 SPG21Q9NZD8 308 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 PUF60Q9UHX1 559 aaKnown RBP14.36□□□□□ -0.11
TCOF1-209ENST00000506630 ZDBF2Q9HCK1 2354 aa14.36□□□□□ -0.11
TCOF1-209ENST00000506630 ZMYM2Q9UBW7 1377 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 HNRNPDLO14979 420 aaKnown RBP14.35□□□□□ -0.11
TCOF1-209ENST00000506630 INPPL1O15357 1258 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 B4GALT3O60512 393 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 GAP43P17677 238 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 SLC11A1P49279 550 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 LIG4P49917 911 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 OSTNP61366 133 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 PLCB3Q01970 1234 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 KRT17Q04695 432 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 NOLC1Q14978 699 aaKnown RBP eCLIP14.35□□□□□ -0.11
TCOF1-209ENST00000506630 TMEM184AQ6ZMB5 413 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 CEP120Q8N960 986 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 VN1R2Q8NFZ6 395 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 TMEM169Q96HH4 297 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 RIPOR3Q96MK2 946 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 FIZ1Q96SL8 496 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 PYM1Q9BRP8 204 aaKnown RBP14.35□□□□□ -0.11
TCOF1-209ENST00000506630 MRPL44Q9H9J2 332 aaKnown RBP14.35□□□□□ -0.11
TCOF1-209ENST00000506630 TBC1D7Q9P0N9 293 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 KCNH3Q9ULD8 1083 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 TBX20Q9UMR3 447 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 NR2E1Q9Y466 385 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 VWA8A3KMH1 1905 aa14.35□□□□□ -0.11
TCOF1-209ENST00000506630 A0A1B0GVL5 298 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 CARNS1A5YM72 827 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 TOM1L1O75674 476 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 GALTP07902 379 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 MCF2P10911 925 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 PFKFB1P16118 471 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 HOXB8P17481 243 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 SCP2P22307 547 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 PROZP22891 400 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ABCD1P33897 745 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 OR1G1P47890 313 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 YARSP54577 528 aaKnown RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ASIC1P78348 528 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 AMPD3Q01432 767 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 GRIK3Q13003 919 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 PLPP4Q5VZY2 271 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ANKRD54Q6NXT1 300 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 TMEM173Q86WV6 379 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 CCDC65Q8IXS2 484 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 COLGALT2Q8IYK4 626 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ZBTB45Q96K62 511 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 TMEM175Q9BSA9 504 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 CCDC94Q9BW85 323 aaPredicted RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 S1PR5Q9H228 398 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 MAGEF1Q9HAY2 307 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 PTPRHQ9HD43 1115 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 NGRNQ9NPE2 291 aaKnown RBP14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ENTPD7Q9NQZ7 604 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 PANK4Q9NVE7 773 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 KBTBD4Q9NVX7 518 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 LZTS1Q9Y250 596 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 FAN1Q9Y2M0 1017 aa14.34□□□□□ -0.11
TCOF1-209ENST00000506630 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 ABLIM1O14639 778 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 NRP1O14786 923 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 CLDN3O15551 220 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GCNT3O95395 438 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 SP100P23497 879 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 CMA1P23946 247 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 CA8P35219 290 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GRM5P41594 1212 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GTF2BQ00403 316 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 MTMR3Q13615 1198 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 ZC2HC1CQ53FD0 456 aaPredicted RBP14.33□□□□□ -0.12
TCOF1-209ENST00000506630 GLRA4Q5JXX5 417 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 LLGL2Q6P1M3 1020 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 UBALD2Q8IYN6 164 aa14.33□□□□□ -0.12
TCOF1-209ENST00000506630 CEP57L1Q8IYX8 460 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms