RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 HSP90AA2PQ14568 343 aaPredicted RBP18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 BRAPQ7Z569 592 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 HACE1Q8IYU2 909 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 C3orf58Q8NDZ4 430 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 TMEM161BQ8NDZ6 487 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 COLEC11Q9BWP8 271 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 MTMR6Q9Y217 621 aa18.39■□□□□ 0.53
PDLIM7-215ENST00000506161 CARNS1A5YM72 827 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 ADAM12O43184 909 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 RFPL2O75678 378 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 THP07101 528 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 PLS3P13797 630 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 MARCKSP29966 332 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 DHX8Q14562 1220 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 DCAF4L1Q3SXM0 396 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 ZNF568Q3ZCX4 644 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 TPRNQ4KMQ1 711 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 KIAA1841Q6NSI8 718 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 ALKAL1Q6UXT8 129 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 EPSTI1Q96J88 318 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 DRC1Q96MC2 740 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 REEP2Q9BRK0 252 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 ADPGKQ9BRR6 497 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 NTPCRQ9BSD7 190 aaKnown RBP18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 MAN1C1Q9NR34 630 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 FAM86C1Q9NVL1 165 aa18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 FBXO2Q9UK22 296 aaPredicted RBP18.38■□□□□ 0.53
PDLIM7-215ENST00000506161 MAPTP10636 758 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 HARSP12081 509 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 GRM5P41594 1212 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 ITIH3Q06033 890 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 XKR4Q5GH76 650 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 GPBP1Q86WP2 473 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 PALB2Q86YC2 1186 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 FBXL6Q8N531 539 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 RIN2Q8WYP3 895 aaPredicted RBP18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 CLIC6Q96NY7 704 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 FIZ1Q96SL8 496 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 EMILIN2Q9BXX0 1053 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 MRPL4Q9BYD3 311 aaKnown RBP18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 NT5C3AQ9H0P0 336 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 DZANK1Q9NVP4 752 aa18.37■□□□□ 0.53
PDLIM7-215ENST00000506161 I3L4J1 428 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 N4BP1O75113 896 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 BRCC3P46736 316 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 CLCNKBP51801 687 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 NCKAP1LP55160 1127 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 ZXDAP98168 799 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 BMS1Q14692 1282 aaKnown RBP18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 LILRA6Q6PI73 481 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 GPR149Q86SP6 731 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 SPIRE2Q8WWL2 714 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 AK8Q96MA6 479 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 USP28Q96RU2 1077 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 IRF2BPLQ9H1B7 796 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 IKZF4Q9H2S9 585 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 TSHZ2Q9NRE2 1034 aa18.36■□□□□ 0.53
PDLIM7-215ENST00000506161 SMIM28A0A1B0GU29 152 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 TGM5O43548 720 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 TADA2AO75478 443 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 BRD1O95696 1058 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 ASGR2P07307 311 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 USP41Q3LFD5 358 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 ZBTB41Q5SVQ8 909 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 FAM171A1Q5VUB5 890 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 RSPO2Q6UXX9 243 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 LNX1Q8TBB1 728 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 RAD54LQ92698 747 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 C18orf25Q96B23 403 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 ZNF707Q96C28 371 aaPredicted RBP18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 CDK5RAP3Q96JB5 506 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 CLSTN3Q9BQT9 956 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 SFXN1Q9H9B4 322 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 TSC2P49815 1807 aa18.35■□□□□ 0.53
PDLIM7-215ENST00000506161 CFAP54Q96N23 3096 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 A0A087X0B3 334 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 LONP1P36776 959 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 UBA7P41226 1012 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 TNFSF9P41273 254 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 SLC10A6Q3KNW5 377 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 CES5AQ6NT32 575 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 SLC39A4Q6P5W5 647 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 PPFIBP1Q86W92 1011 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 CEP57Q86XR8 500 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 ATOH1Q92858 354 aaPredicted RBP18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 TIPINQ9BVW5 301 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 C17orf75Q9HAS0 396 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 ANKFY1Q9P2R3 1169 aa18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 RBM19Q9Y4C8 960 aaKnown RBP18.34■□□□□ 0.53
PDLIM7-215ENST00000506161 SF3B1O75533 1304 aaKnown RBP eCLIP18.33■□□□□ 0.534e-7■■■■■ 44.1
PDLIM7-215ENST00000506161 TISP43B9A030 160 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 NR1I2O75469 434 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 PDGFBP01127 241 aaPredicted RBP18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 ADH1AP07327 375 aa18.33■□□□□ 0.52
PDLIM7-215ENST00000506161 MCF2P10911 925 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms