RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 TMC5Q6UXY8 1006 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 UNC13DQ70J99 1090 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 ZNF410Q86VK4 478 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 FLCNQ8NFG4 579 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 RDM1Q8NG50 284 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 AUTS2Q8WXX7 1259 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 CEP89Q96ST8 783 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 EMILIN2Q9BXX0 1053 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 RHOBTB2Q9BYZ6 727 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 TRIM5Q9C035 493 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 SEMA4AQ9H3S1 761 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 KCNK12Q9HB15 430 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 IGSF9Q9P2J2 1179 aa11.79□□□□□ -0.52
CPNE4-206ENST00000505957 MYH9P35579 1960 aaKnown RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 PI15O43692 258 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 GAS7O60861 476 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 LILRB3O75022 631 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 CSDE1O75534 798 aaKnown RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 OFD1O75665 1012 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 CCT6AP40227 531 aaKnown RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 DNM2P50570 870 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 CLCN4P51793 760 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 EHHADHQ08426 723 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 DRP2Q13474 957 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 DHX8Q14562 1220 aaKnown RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 ANGPT1Q15389 498 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 UGCGQ16739 394 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 KMT5BQ4FZB7 885 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 XKR3Q5GH77 459 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 SPATA1Q5VX52 437 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 TWF2Q6IBS0 349 aaKnown RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 CYP26C1Q6V0L0 522 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 DTWD2Q8NBA8 298 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 CMASQ8NFW8 434 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 BCL7CQ8WUZ0 217 aaPredicted RBP11.78□□□□□ -0.52
CPNE4-206ENST00000505957 PGBD4Q96DM1 585 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 KLHL5Q96PQ7 755 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 VN1R3Q9BXE9 311 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 BLZF1Q9H2G9 400 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 TUFT1Q9NNX1 390 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 FAM105AQ9NUU6 356 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 RWDD2AQ9UIY3 292 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 DMDP11532 3685 aa11.78□□□□□ -0.52
CPNE4-206ENST00000505957 A0A087WZ62 844 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 FRMD3A2A2Y4 597 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 CBFA2T2O43439 604 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 MED24O75448 989 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 SPATA31C1P0DKV0 1188 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
CPNE4-206ENST00000505957 KLRC2P26717 231 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 CASP1P29466 404 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 SLC11A1P49279 550 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 RNASELQ05823 741 aaKnown RBP11.77□□□□□ -0.53
CPNE4-206ENST00000505957 PAK1Q13153 545 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 PSMD2Q13200 908 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 STIM1Q13586 685 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 ECM1Q16610 540 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 LRCH2Q5VUJ6 765 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 ISM2Q6H9L7 571 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 STAMQ92783 540 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 LPPQ93052 612 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 DHTKD1Q96HY7 919 aaPredicted RBP11.77□□□□□ -0.53
CPNE4-206ENST00000505957 MED15Q96RN5 788 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 FDXACB1Q9BRP7 624 aaPredicted RBP11.77□□□□□ -0.53
CPNE4-206ENST00000505957 TMEM175Q9BSA9 504 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 TEKT3Q9BXF9 490 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 UNC45AQ9H3U1 944 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 EXOC1Q9NV70 894 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 KANSL3Q9P2N6 904 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 WNT16Q9UBV4 365 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 FBXL21Q9UKT6 434 aa11.77□□□□□ -0.53
CPNE4-206ENST00000505957 PIN4Q9Y237 131 aaKnown RBP11.77□□□□□ -0.53
CPNE4-206ENST00000505957 MYMKA6NI61 221 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 SPDYE4A6NLX3 237 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MEIS3P2A8K0S8 358 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 CHMP2AO43633 222 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MAFO75444 373 aaPredicted RBP11.76□□□□□ -0.53
CPNE4-206ENST00000505957 STBD1O95210 358 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 ALDH2P05091 517 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 CNPP09543 421 aaKnown RBP11.76□□□□□ -0.53
CPNE4-206ENST00000505957 ASIC1P78348 528 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 FANCCQ00597 558 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MCM6Q14566 821 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 EPHA7Q15375 998 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MTERF2Q49AM1 385 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 CDKAL1Q5VV42 579 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 CATSPER4Q7RTX7 472 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 KCNK18Q7Z418 384 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MRPL10Q7Z7H8 261 aaKnown RBP11.76□□□□□ -0.53
CPNE4-206ENST00000505957 ZSCAN30Q86W11 494 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 ZNF280BQ86YH2 543 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 SIX5Q8N196 739 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 FEZF2Q8TBJ5 459 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 URGCPQ8TCY9 931 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 NXPE3Q969Y0 559 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 HSD17B14Q9BPX1 270 aa11.76□□□□□ -0.53
CPNE4-206ENST00000505957 JPH2Q9BR39 696 aaPredicted RBP11.76□□□□□ -0.53
CPNE4-206ENST00000505957 MRPL17Q9NRX2 175 aaKnown RBP11.76□□□□□ -0.53
CPNE4-206ENST00000505957 BMP2KQ9NSY1 1161 aaPredicted RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms