RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 MINDY4Q4G0A6 757 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 KHDC1Q4VXA5 237 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MAMDC4Q6UXC1 1216 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 ANKRD35Q8N283 1001 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MB21D1Q8N884 522 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 TTC8Q8TAM2 541 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 NSUN6Q8TEA1 469 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 CASKIN2Q8WXE0 1202 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MIEF2Q96C03 454 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MRGPRX4Q96LA9 322 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 C8orf49Q96NF6 230 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 SPON1Q9HCB6 807 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 MOCS1Q9NZB8 636 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 JAG2Q9Y219 1238 aa5.23□□□□□ -1.57
TOPBP1-204ENST00000505804 PRR5-ARHGAP8B1AHC4 643 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 ALDH2P05091 517 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 MAP2K6P52564 334 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 CSRP2Q16527 193 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 BMT2Q1RMZ1 405 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 HS1BP3Q53T59 392 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 GADL1Q6ZQY3 521 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 DOK3Q7L591 496 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 GPRIN1Q7Z2K8 1008 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 DCBLD1Q8N8Z6 715 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 MDGA1Q8NFP4 955 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 IFI44Q8TCB0 444 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 ATXN2LQ8WWM7 1075 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 PGBD4Q96DM1 585 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 C1GALT1C1Q96EU7 318 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 FAM89AQ96GI7 184 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 TAAR9Q96RI9 348 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 ADOQ96SZ5 270 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 ACO2Q99798 780 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 CPEB1Q9BZB8 566 aaKnown RBP5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 SMPD4Q9NXE4 827 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 SLC23A1Q9UHI7 598 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 PCDHA3Q9Y5H8 950 aa5.22□□□□□ -1.57
TOPBP1-204ENST00000505804 GOLGA6CA6NDK9 693 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 GOLGA6BA6NDN3 693 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 B5MCH6 92 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 PJA2O43164 708 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 TEX33O43247 280 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CTNND1O60716 968 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 IPO13O94829 963 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 FTLP02792 175 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 SNRPA1P09661 255 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 GOLGA6DP0CG33 693 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 ATF3P18847 181 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 ATP5JP18859 108 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CLRN1P58418 232 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CTXN1P60606 82 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 RAP2BP61225 183 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 TLE1Q04724 770 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 SNAPC2Q13487 334 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 RAB39AQ14964 217 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 ARHGAP29Q52LW3 1261 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 OTUD7BQ6GQQ9 843 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 Q6ZRM9 215 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 UBE3BQ7Z3V4 1068 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 KRTAP1-3Q8IUG1 177 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CAMKK1Q8N5S9 505 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 RNF169Q8NCN4 708 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 C3orf20Q8ND61 904 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 PPP1R35Q8TAP8 253 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 TFAP2CQ92754 450 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 EDAQ92838 391 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 KLC2Q9H0B6 622 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 GOLGA6AQ9NYA3 693 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CALCOCO1Q9P1Z2 691 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 POGKQ9P215 609 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 CNOT11Q9UKZ1 510 aaKnown RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 TCAF1Q9Y4C2 921 aa5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 ARID1BQ8NFD5 2236 aaPredicted RBP5.21□□□□□ -1.58
TOPBP1-204ENST00000505804 TCRBV7S2A1N4TA0A589 114 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 VSTM5A8MXK1 200 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 SBK3P0C264 359 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 MALP21145 153 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 SCNN1GP51170 649 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 RABGGTBP53611 331 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 CREMQ03060 361 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 GFOD2Q3B7J2 385 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 CCDC157Q569K6 752 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 THEMIS2Q5TEJ8 643 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 C1QL3Q5VWW1 255 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 EFCAB12Q6NXP0 572 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 ZNF529Q6P280 563 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 SEM1Q6ZVN7 128 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 PLXDC1Q8IUK5 500 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 SH2D3CQ8N5H7 860 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 TTC9BQ8N6N2 239 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 ZBTB34Q8NCN2 500 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 OR52N2Q8NGI0 321 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 ZFP28Q8NHY6 868 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 RGMAQ96B86 450 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 RUNDC1Q96C34 613 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 MNTQ99583 582 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 CGRRF1Q99675 332 aa5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 C11orf54Q9H0W9 315 aaPredicted RBP5.2□□□□□ -1.58
TOPBP1-204ENST00000505804 KMT5AQ9NQR1 393 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms