RNA–Protein interactions for RNA: ENST00000505625.5

MATR3-211, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 7,306 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-211ENST00000505625 AP3D1O14617 1153 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 SCAMP1O15126 338 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 HSPA6P17066 643 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PSMC2P35998 433 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 GGCXP38435 758 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 WASP42768 502 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 ZCCHC8Q6NZY4 707 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 TRMT11Q7Z4G4 463 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 NLRP14Q86W24 1093 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 NSUN6Q8TEA1 469 aaKnown RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 ZNF496Q96IT1 587 aaPredicted RBP5.48□□□□□ -1.53
MATR3-211ENST00000505625 EPYCQ99645 322 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PLEKHA5Q9HAU0 1116 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 CD274Q9NZQ7 290 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 PCSK1NQ9UHG2 260 aa5.48□□□□□ -1.53
MATR3-211ENST00000505625 GPR182O15218 404 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 VPS4BO75351 444 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CYP2C9P11712 490 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 HMOX2P30519 316 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MLLT1Q03111 559 aaPredicted RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 LRRC69Q6ZNQ3 347 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 FGD2Q7Z6J4 655 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 DDX42Q86XP3 938 aaKnown RBP eCLIP5.47□□□□□ -1.53
MATR3-211ENST00000505625 MCEMP1Q8IX19 187 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 LRRC71Q8N4P6 559 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ALLCQ8N6M5 410 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TDRD7Q8NHU6 1098 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 TTC17Q96AE7 1141 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TMEM143Q96AN5 459 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 XPO6Q96QU8 1125 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 OSBPL6Q9BZF3 934 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MTFR1LQ9H019 292 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TRPV6Q9H1D0 765 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CDH7Q9ULB5 785 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PCDHA6Q9UN73 950 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 LRCH1Q9Y2L9 728 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ZNF711Q9Y462 761 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PCDHA8Q9Y5H6 950 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CFAP43Q8NDM7 1665 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 KRIT1O00522 736 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 NCAM2O15394 837 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ALOX15P16050 662 aaPredicted RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 LBX1P52954 281 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SP3Q02447 781 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 GRIN1Q05586 938 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TSNAXIP1Q2TAA8 658 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ZSCAN23Q3MJ62 389 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SNX30Q5VWJ9 437 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PACS2Q86VP3 889 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 FAM129CQ86XR2 697 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PCSK9Q8NBP7 692 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 ELMO2Q96JJ3 720 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 DACH2Q96NX9 599 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SH2D3AQ9BRG2 576 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TUBGCP2Q9BSJ2 902 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TLR8Q9NR97 1041 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 HOMER3Q9NSC5 361 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SMPD4Q9NXE4 827 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 EPS15L1Q9UBC2 864 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MORC2Q9Y6X9 1032 aaPredicted RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 UBE4BO95155 1302 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 PDZK1P1A8MUH7 402 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MSH4O15457 936 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 GFPT2O94808 682 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 RPN2P04844 631 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 GSNP06396 782 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ARF5P84085 180 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ZNF177Q13360 481 aaPredicted RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 MTSS1LQ765P7 747 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 DET1Q7L5Y6 550 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 VSIG1Q86XK7 387 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 NOSTRINQ8IVI9 506 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 DSELQ8IZU8 1212 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MIER2Q8N344 545 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PARVBQ9HBI1 364 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 VCX3AQ9NNX9 186 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PARD3Q8TEW0 1356 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SUPT3HO75486 399 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CLTBP09497 229 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 KCNA2P16389 499 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MSX1P28360 303 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TPI1P60174 286 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 NCAPHQ15003 741 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TMED2Q15363 201 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 SURF1Q15526 300 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CTXN3Q4LDR2 81 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 TRIM68Q6AZZ1 485 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PACS1Q6VY07 963 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 G2E3Q7L622 706 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ITIH5Q86UX2 942 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 NEDD1Q8NHV4 660 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 CCDC17Q96LX7 622 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 PRPF18Q99633 342 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 STK33Q9BYT3 514 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 DHX35Q9H5Z1 703 aaKnown RBP5.47□□□□□ -1.53
MATR3-211ENST00000505625 MAP3K1Q13233 1512 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 ABCC2Q92887 1545 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 MAP3K19Q56UN5 1328 aa5.47□□□□□ -1.53
MATR3-211ENST00000505625 POTEB3A0JP26 581 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms