RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 FANCBQ8NB91 859 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 PIK3R5Q8WYR1 880 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 PPP1R16BQ96T49 567 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 ZNF577Q9BSK1 485 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 PIN4Q9Y237 131 aaKnown RBP6.74□□□□□ -1.33
GYPB-204ENST00000504951 GIT1Q9Y2X7 761 aa6.74□□□□□ -1.33
GYPB-204ENST00000504951 RBM8AQ9Y5S9 174 aaKnown RBP6.74□□□□□ -1.33
GYPB-204ENST00000504951 A0A087WZ62 844 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 SMCO2A6NFE2 343 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 K7ESF4 209 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 SH2B2O14492 632 aaPredicted RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 ST8SIA5O15466 376 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 ASAP2O43150 1006 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 PRC1O43663 620 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 AKAP3O75969 853 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 AVPP01185 164 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 SSBP05455 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
GYPB-204ENST00000504951 CHRNB1P11230 501 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 FGFR4P22455 802 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 RAP1GAPP47736 663 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 USP11P51784 963 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 AFF1P51825 1210 aaKnown RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 JAK3P52333 1124 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 IRX6P78412 446 aaPredicted RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 RAB33AQ14088 237 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 FUT10Q6P4F1 479 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 TSSK4Q6SA08 328 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 CATSPER4Q7RTX7 472 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 GRASPQ7Z6J2 395 aaPredicted RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 WDR5BQ86VZ2 330 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 PALB2Q86YC2 1186 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 NPAS3Q8IXF0 933 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 CYP4X1Q8N118 509 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 CCDC82Q8N4S0 544 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 SMG8Q8ND04 991 aaKnown RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 IRF7Q92985 503 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 LENG9Q96B70 501 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 ZC3H10Q96K80 434 aaKnown RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 CLSTN3Q9BQT9 956 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 FDXACB1Q9BRP7 624 aaPredicted RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 LRRC2Q9BYS8 371 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 GPR62Q9BZJ7 368 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 TRPV4Q9HBA0 871 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 DISC1Q9NRI5 854 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 RBM28Q9NW13 759 aaKnown RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 BARHL2Q9NY43 387 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 TCEAL9Q9UHQ7 104 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 RALYQ9UKM9 306 aaKnown RBP6.73□□□□□ -1.33
GYPB-204ENST00000504951 ADAM28Q9UKQ2 775 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 INPP5FQ9Y2H2 1132 aa6.73□□□□□ -1.33
GYPB-204ENST00000504951 RALGAPA1Q6GYQ0 2036 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 DOCK6Q96HP0 2047 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 NOTCH4Q99466 2003 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 GREB1Q4ZG55 1949 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ARHGEF37A1IGU5 675 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 FAM221BA6H8Z2 402 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ARL5CA6NH57 179 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 SRRM3A6NNA2 597 aaPredicted RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 C2CD2LO14523 706 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ADAMTS3O15072 1205 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 AXIN1O15169 862 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 CSDE1O75534 798 aaKnown RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 EPN2O95208 641 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 CD72P21854 359 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 MCM5P33992 734 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ADCY7P51828 1080 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 RCAN1P53805 252 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 PRKCEQ02156 737 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 SPIRE1Q08AE8 756 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ELAVL2Q12926 359 aaKnown RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 DRP2Q13474 957 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 DGKKQ5KSL6 1271 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 PPM1LQ5SGD2 360 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 STPG1Q5TH74 334 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 LIN9Q5TKA1 542 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 WWC2Q6AWC2 1192 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 CASC1Q6TDU7 716 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 HEATR3Q7Z4Q2 680 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 SKAP1Q86WV1 359 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 FAM160A2Q8N612 972 aaPredicted RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 GSTCDQ8NEC7 633 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 ITFG1Q8TB96 612 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 LNX1Q8TBB1 728 aaPredicted RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 RUFY2Q8WXA3 655 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 GATA6Q92908 595 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 E2F7Q96AV8 911 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 PGBD1Q96JS3 809 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 SCLT1Q96NL6 688 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 LSG1Q9H089 658 aaKnown RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 GBP3Q9H0R5 595 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 LMAN1LQ9HAT1 526 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 HEBP1Q9NRV9 189 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 DNMT3BQ9UBC3 853 aaKnown RBP6.72□□□□□ -1.33
GYPB-204ENST00000504951 SPEGQ15772 3267 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 WDR81Q562E7 1941 aa6.72□□□□□ -1.33
GYPB-204ENST00000504951 FRYQ5TBA9 3013 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 CCDC69A6NI79 296 aa6.71□□□□□ -1.34
GYPB-204ENST00000504951 C1QTNF9BB2RNN3 333 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms