RNA–Protein interactions for RNA: ENST00000504927.5

DDR1-255, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-255ENST00000504927 CUL4BQ13620 913 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 KANK3Q6NY19 840 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 SLC39A4Q6P5W5 647 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 TMEM173Q86WV6 379 aaPredicted RBP22.56■■□□□ 1.2
DDR1-255ENST00000504927 SYCP3Q8IZU3 236 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 VPS52Q8N1B4 723 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 PPP1R10Q96QC0 940 aaKnown RBP22.56■■□□□ 1.2
DDR1-255ENST00000504927 TSPAN18Q96SJ8 248 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 MSTO1Q9BUK6 570 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 ENTPD7Q9NQZ7 604 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 CNTN3Q9P232 1028 aa22.56■■□□□ 1.2
DDR1-255ENST00000504927 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.56■■□□□ 1.2
DDR1-255ENST00000504927 ANKRD63C9JTQ0 380 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 EIF3DO15371 548 aaKnown RBP eCLIP22.55■■□□□ 1.2
DDR1-255ENST00000504927 CASP5P51878 434 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 POU5F1Q01860 360 aaKnown RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 EHHADHQ08426 723 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 SMC1AQ14683 1233 aaKnown RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 NAB2Q15742 525 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 TPRNQ4KMQ1 711 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 FAM26FQ5R3K3 315 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 MRPL43Q8N983 215 aaKnown RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 ATXN2LQ8WWM7 1075 aaKnown RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 SNX27Q96L92 541 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 UROC1Q96N76 676 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 CDCA3Q99618 268 aaPredicted RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 TLE6Q9H808 572 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 THEGQ9P2T0 379 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 PRG3Q9Y2Y8 225 aaPredicted RBP22.55■■□□□ 1.2
DDR1-255ENST00000504927 TCHHQ07283 1943 aa22.55■■□□□ 1.2
DDR1-255ENST00000504927 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.54■■□□□ 1.2
DDR1-255ENST00000504927 KCNA1Q09470 495 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 PSMD2Q13200 908 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 COL19A1Q14993 1142 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 AAK1Q2M2I8 961 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 SLC10A6Q3KNW5 377 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 KRBA2Q6ZNG9 492 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 CD302Q8IX05 232 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 GRAMD1CQ8IYS0 662 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 BCL7CQ8WUZ0 217 aaPredicted RBP22.54■■□□□ 1.2
DDR1-255ENST00000504927 POMGNT1Q8WZA1 660 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 CXCL16Q9H2A7 254 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 GOLPH3LQ9H4A5 285 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 RPF1Q9H9Y2 349 aaKnown RBP22.54■■□□□ 1.2
DDR1-255ENST00000504927 AGO2Q9UKV8 859 aaKnown RBP22.54■■□□□ 1.2
DDR1-255ENST00000504927 SSX2IPQ9Y2D8 614 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 IRAK3Q9Y616 596 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 TTC28Q96AY4 2481 aa22.54■■□□□ 1.2
DDR1-255ENST00000504927 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.53■■□□□ 1.2
DDR1-255ENST00000504927 FAM189A1O60320 539 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 TADA2AO75478 443 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 PRPF6O94906 941 aaKnown RBP22.53■■□□□ 1.2
DDR1-255ENST00000504927 CSPG5O95196 566 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 CXCL14O95715 111 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 CTSAP10619 480 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 GARTP22102 1010 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 CASP1P29466 404 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 HYAL1Q12794 435 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 HSP90AA2PQ14568 343 aaPredicted RBP22.53■■□□□ 1.2
DDR1-255ENST00000504927 SEZ6Q53EL9 994 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 PLPP4Q5VZY2 271 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 ZNF507Q8TCN5 953 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 PABPC5Q96DU9 382 aaKnown RBP22.53■■□□□ 1.2
DDR1-255ENST00000504927 DDX27Q96GQ7 796 aaKnown RBP22.53■■□□□ 1.2
DDR1-255ENST00000504927 ZBP1Q9H171 429 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 MARCH5Q9NX47 278 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 ADAM28Q9UKQ2 775 aa22.53■■□□□ 1.2
DDR1-255ENST00000504927 PLXNA4Q9HCM2 1894 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 TTC26A0AVF1 554 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 LDHAP00338 332 aaKnown RBP22.52■■□□□ 1.2
DDR1-255ENST00000504927 SOD2P04179 222 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 ADRB2P07550 413 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 ADSSP30520 456 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 GLRA4Q5JXX5 417 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 DCLRE1AQ6PJP8 1040 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 EPM2AIP1Q7L775 607 aaPredicted RBP22.52■■□□□ 1.2
DDR1-255ENST00000504927 HPS3Q969F9 1004 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 CCDC47Q96A33 483 aaKnown RBP22.52■■□□□ 1.2
DDR1-255ENST00000504927 FGFBP2Q9BYJ0 223 aa22.52■■□□□ 1.2
DDR1-255ENST00000504927 CPSF3Q9UKF6 684 aaKnown RBP22.52■■□□□ 1.2
DDR1-255ENST00000504927 C2orf71A6NGG8 1288 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 CASTOR2A6NHX0 329 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 KIAA0391O15091 583 aaKnown RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 KLRC4O43908 158 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 EFEMP2O95967 443 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 CXCL8P10145 99 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 RPL9P32969 192 aaKnown RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 TNFSF9P41273 254 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 NRIP1P48552 1158 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 SNRPFP62306 86 aaKnown RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 MRPS5P82675 430 aaKnown RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 TFF2Q03403 129 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 PPP2R3AQ06190 1150 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 CTC1Q2NKJ3 1217 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 ADGRD2Q7Z7M1 963 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 FMR1NBQ8N0W7 255 aaPredicted RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 EFHBQ8N7U6 833 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 TMEM87AQ8NBN3 555 aa22.51■■□□□ 1.19
DDR1-255ENST00000504927 ZMAT2Q96NC0 199 aaKnown RBP22.51■■□□□ 1.19
DDR1-255ENST00000504927 IGFLR1Q9H665 355 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms