RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 VPS72Q15906 364 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 LCE1DQ5T752 114 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 TPH2Q8IWU9 490 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 PRR18Q8N4B5 295 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 DCBLD1Q8N8Z6 715 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 IFI44Q8TCB0 444 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 TMX3Q96JJ7 454 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 PUS7Q96PZ0 661 aaKnown RBP6.67□□□□□ -1.34
COPS4-203ENST00000504274 CDK5RAP1Q96SZ6 601 aaKnown RBP6.67□□□□□ -1.34
COPS4-203ENST00000504274 GTPBP4Q9BZE4 634 aaKnown RBP6.67□□□□□ -1.34
COPS4-203ENST00000504274 TDP1Q9NUW8 608 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 TMEM140Q9NV12 185 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 XDHP47989 1333 aa6.67□□□□□ -1.34
COPS4-203ENST00000504274 E2F8A0AVK6 867 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 GRXCR1A8MXD5 290 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 CLRN1P58418 232 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 RAP2BP61225 183 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 CRHR2Q13324 411 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 NFE2Q16621 373 aaPredicted RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 USP39Q53GS9 565 aaKnown RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 DCAF17Q5H9S7 520 aaPredicted RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 NAIF1Q69YI7 327 aaPredicted RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 USP45Q70EL2 814 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 OR10H5Q8NGA6 315 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 NSUN6Q8TEA1 469 aaKnown RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 SH3RF3Q8TEJ3 882 aaPredicted RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 CASKIN2Q8WXE0 1202 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 TFAP2CQ92754 450 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 CLPTM1LQ96KA5 538 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 MRGPRX4Q96LA9 322 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 GPR20Q99678 358 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 MOCS1Q9NZB8 636 aa6.66□□□□□ -1.34
COPS4-203ENST00000504274 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.66□□□□□ -1.34
COPS4-203ENST00000504274 LRRC14BA6NHZ5 514 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 C1QTNF3-AMACRE9PGA6 284 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 LEFTY2O00292 366 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 PJA2O43164 708 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 CT47B1P0C2W7 299 aaPredicted RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 ZNF280AP59817 542 aaPredicted RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 PTH1RQ03431 593 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 CNGB1Q14028 1251 aaPredicted RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 NRN1LQ496H8 165 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 METTL24Q5JXM2 366 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 OTUD7BQ6GQQ9 843 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 RSPH3Q86UC2 560 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 TMPRSS6Q8IU80 811 aa6.65□□□□□ -1.34
COPS4-203ENST00000504274 NUP88Q99567 741 aaPredicted RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 NOB1Q9ULX3 412 aaKnown RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 CFAP20Q9Y6A4 193 aaKnown RBP6.65□□□□□ -1.34
COPS4-203ENST00000504274 PRPF3O43395 683 aaKnown RBP6.64□□□□□ -1.35
COPS4-203ENST00000504274 SGTAO43765 313 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 SCGB1D2O95969 90 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 SNRPA1P09661 255 aaKnown RBP6.64□□□□□ -1.35
COPS4-203ENST00000504274 ATP5JP18859 108 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 AKAP5P24588 427 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 APOBEC3AP31941 199 aaPredicted RBP6.64□□□□□ -1.35
COPS4-203ENST00000504274 CTXN1P60606 82 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 DGCR2P98153 550 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 ZNF267Q14586 743 aaPredicted RBP6.64□□□□□ -1.35
COPS4-203ENST00000504274 EFCAB12Q6NXP0 572 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 DRICH1Q6PGQ1 229 aaPredicted RBP6.64□□□□□ -1.35
COPS4-203ENST00000504274 RNF207Q6ZRF8 634 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 UBE3BQ7Z3V4 1068 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 C1orf210Q8IVY1 113 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 DRC7Q8IY82 874 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 CAMKK2Q96RR4 588 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 NDC1Q9BTX1 674 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 SLC12A5Q9H2X9 1139 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 FBXO34Q9NWN3 711 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 CEP72Q9P209 647 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 POGKQ9P215 609 aa6.64□□□□□ -1.35
COPS4-203ENST00000504274 TCRBV7S2A1N4TA0A589 114 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 GOLGA6L6A8MZA4 724 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 RFPL1O75677 317 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 C1SP09871 688 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 TLE1Q04724 770 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 TOB2Q14106 344 aaPredicted RBP6.63□□□□□ -1.35
COPS4-203ENST00000504274 PPP2R5AQ15172 486 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 ATXN7L2Q5T6C5 722 aaPredicted RBP6.63□□□□□ -1.35
COPS4-203ENST00000504274 METRNLQ641Q3 311 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 ZNF529Q6P280 563 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 PLXDC1Q8IUK5 500 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 HPS3Q969F9 1004 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 LRGUKQ96M69 825 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 NEU1Q99519 415 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 ANLNQ9NQW6 1124 aa6.63□□□□□ -1.35
COPS4-203ENST00000504274 PNMA8BQ9ULN7 279 aaPredicted RBP6.63□□□□□ -1.35
COPS4-203ENST00000504274 DRGXA6NNA5 263 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 FAM20BO75063 409 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 SBK3P0C264 359 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 INSRRP14616 1297 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 VCAM1P19320 739 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 LPOP22079 712 aaPredicted RBP6.62□□□□□ -1.35
COPS4-203ENST00000504274 SLC6A2P23975 617 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 CHN2P52757 468 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 SLC25A3Q00325 362 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 NHLH2Q02577 135 aa6.62□□□□□ -1.35
COPS4-203ENST00000504274 KHDC1Q4VXA5 237 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms